RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 WDR59Q6PJI9 974 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 LCLAT1Q6UWP7 414 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
LIME1-208ENST00000493265 TTC30AQ86WT1 665 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 STKLD1Q8NE28 680 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 SLC7A14Q8TBB6 771 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 SLC22A17Q8WUG5 538 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 DDX1Q92499 740 aaKnown RBP18.19■□□□□ 0.5
LIME1-208ENST00000493265 KCNK16Q96T55 309 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.19■□□□□ 0.5
LIME1-208ENST00000493265 TMEM30AQ9NV96 361 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 FBXW11Q9UKB1 542 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 FAM50BQ9Y247 325 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 HCFC2Q9Y5Z7 792 aa18.19■□□□□ 0.5
LIME1-208ENST00000493265 F8VP50 259 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 LINC01565O15544 149 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 DCXO43602 365 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 BEST1O76090 585 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
LIME1-208ENST00000493265 ANXA13P27216 316 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 BCAT1P54687 386 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 SLC8A3P57103 927 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 ZP2Q05996 745 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 PDE4CQ08493 712 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 COL19A1Q14993 1142 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 HGSNATQ68CP4 663 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 ANKRD52Q8NB46 1076 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 GIPC2Q8TF65 315 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
LIME1-208ENST00000493265 FUBP3Q96I24 572 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIME1-208ENST00000493265 CHP1Q99653 195 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 SMOQ99835 787 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 DUSP16Q9BY84 665 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 ABCB6Q9NP58 842 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 ARHGAP20Q9P2F6 1191 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 YIPF1Q9Y548 306 aa18.18■□□□□ 0.5
LIME1-208ENST00000493265 TULP2O00295 520 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 C8AP07357 584 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 NPR3P17342 541 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 HNRNPH3P31942 346 aaKnown RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 LTBRP36941 435 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 EIF4A3P38919 411 aaKnown RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 PRKCIP41743 596 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 ALDH1A3P47895 512 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 TUFMP49411 452 aaKnown RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 RGS7P49802 495 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 FMO1Q01740 532 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 BST2Q10589 180 aaKnown RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 TWF1Q12792 350 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 IFRD2Q12894 506 aaPredicted RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 SMYD5Q6GMV2 418 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 VSTM1Q6UX27 236 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 CLEC20AQ6ZU45 233 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 CCDC149Q6ZUS6 474 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 ZNF677Q86XU0 584 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 TCEAL8Q8IYN2 117 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 VN1R2Q8NFZ6 395 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 PANX2Q96RD6 677 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 CDCA3Q99618 268 aaPredicted RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 DMAP1Q9NPF5 467 aaPredicted RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 CEP83Q9Y592 693 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 INSL5Q9Y5Q6 135 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 BZW2Q9Y6E2 419 aaKnown RBP18.17■□□□□ 0.5
LIME1-208ENST00000493265 C5orf42Q9H799 3197 aa18.17■□□□□ 0.5
LIME1-208ENST00000493265 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 PIK3R2O00459 728 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 RFPL2O75678 378 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 LRG1P02750 347 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 MAGEA11P43364 429 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 GSDMDP57764 484 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 RPL10AP62906 217 aaKnown RBP18.16■□□□□ 0.5
LIME1-208ENST00000493265 DLX2Q07687 328 aaPredicted RBP18.16■□□□□ 0.5
LIME1-208ENST00000493265 PPM1LQ5SGD2 360 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 NAA35Q5VZE5 725 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 ALYREFQ86V81 257 aaKnown RBP18.16■□□□□ 0.5
LIME1-208ENST00000493265 C12orf76Q8N812 135 aaPredicted RBP18.16■□□□□ 0.5
LIME1-208ENST00000493265 C1orf131Q8NDD1 294 aaKnown RBP18.16■□□□□ 0.5
LIME1-208ENST00000493265 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 CPA5Q8WXQ8 436 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 PCDHB18PQ96TA0 734 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 APOL5Q9BWW9 433 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 DEF6Q9H4E7 631 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 ST7Q9NRC1 585 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 PCDHGC3Q9UN70 934 aa18.16■□□□□ 0.5
LIME1-208ENST00000493265 TRIM66O15016 1216 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 CCL16O15467 120 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 NCK2O43639 380 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 ATF6P18850 670 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 MEA1Q16626 185 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 ELMSAN1Q6PJG2 1045 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 VPS36Q86VN1 386 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 ADHFE1Q8IWW8 467 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 EFHBQ8N7U6 833 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 TMEM35BQ8NCS4 154 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 PLEKHA4Q9H4M7 779 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 CYTH4Q9UIA0 394 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 MAFFQ9ULX9 164 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms