RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 HRO43593 1189 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 TADA3O75528 432 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 RTN3O95197 1032 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-205ENST00000492851 NFATC1O95644 943 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 GJA4P35212 333 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 MYL6P60660 151 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 KRT85P78386 507 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 BIRC3Q13489 604 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 RSPO4Q2I0M5 234 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-205ENST00000492851 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 ZNF667Q5HYK9 610 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 MDH1BQ5I0G3 518 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 Q6ZS52 159 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 CEP68Q76N32 757 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 STKLD1Q8NE28 680 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 PDZD8Q8NEN9 1154 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 SH3RF2Q8TEC5 729 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 PARD3BQ8TEW8 1205 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 OVCA2Q8WZ82 227 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 TAF4BQ92750 862 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 CD101Q93033 1021 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 LOXL4Q96JB6 756 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.29
COL6A1-205ENST00000492851 DNAI2Q9GZS0 605 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 DMAC2Q9NW81 257 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 COMMD8Q9NX08 183 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 USP18Q9UMW8 372 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 FRMD4BQ9Y2L6 1034 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 TCHHQ07283 1943 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 FANCMQ8IYD8 2048 aa13.27□□□□□ -0.29
COL6A1-205ENST00000492851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-205ENST00000492851 ZNF840PA6NDX5 716 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 F8VP50 259 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 HCRTO43612 131 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 CALUO43852 315 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-205ENST00000492851 AKAP3O75969 853 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 CLSTN1O94985 981 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 ARSAP15289 507 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 CASP1P29466 404 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 SLC7A9P82251 487 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 STK4Q13043 487 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 USP4Q13107 963 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 NCOA4Q13772 614 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 ZNF699Q32M78 642 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 EML3Q32P44 896 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 FSTL4Q6MZW2 842 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 GVINP1Q7Z2Y8 2422 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-205ENST00000492851 DDX42Q86XP3 938 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL6A1-205ENST00000492851 NUP93Q8N1F7 819 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 ACDQ96AP0 544 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 SLC22A12Q96S37 553 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 SCAND2PQ9GZW5 306 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-205ENST00000492851 XYLT2Q9H1B5 865 aa13.26□□□□□ -0.29
COL6A1-205ENST00000492851 CDV3Q9UKY7 258 aaKnown RBP13.26□□□□□ -0.29
COL6A1-205ENST00000492851 WDR87Q6ZQQ6 2873 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 C2orf78A6NCI8 922 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 OTOL1A6NHN0 477 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-205ENST00000492851 MAPK13O15264 365 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
COL6A1-205ENST00000492851 KLRC4O43908 158 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 C4BPAP04003 597 aaKnown RBP13.25□□□□□ -0.29
COL6A1-205ENST00000492851 PFKFB1P16118 471 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 YWHAQP27348 245 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 SYKP43405 635 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 ENPEPQ07075 957 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 CSRP2Q16527 193 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 HEATR6Q6AI08 1181 aaKnown RBP13.25□□□□□ -0.29
COL6A1-205ENST00000492851 SYT13Q7L8C5 426 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 TTC16Q8NEE8 873 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 GAB3Q8WWW8 586 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 RTKNQ9BST9 563 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 TBC1D14Q9P2M4 693 aa13.25□□□□□ -0.29
COL6A1-205ENST00000492851 A0A1B0GVL5 298 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 LRRIQ3A6PVS8 624 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-205ENST00000492851 LEFTY2O00292 366 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 RNF40O75150 1001 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
COL6A1-205ENST00000492851 ABL1P00519 1130 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 EGFP01133 1207 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 NR3C1P04150 777 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 TGM1P22735 817 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 RPL13P26373 211 aaKnown RBP13.24□□□□□ -0.29
COL6A1-205ENST00000492851 DMWDQ09019 674 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 TAF10Q12962 218 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 PKP1Q13835 747 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 CCDC142Q17RM4 750 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-205ENST00000492851 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 ADGRG2Q8IZP9 1017 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms