RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	DDX17	Q92841	729 aa	Known RBP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	ZNF622	Q969S3	477 aa	Known RBP eCLIP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	ERP27	Q96DN0	273 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	APIP	Q96GX9	242 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444		Q96MF0	132 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	ALOXE3	Q9BYJ1	711 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	SMOC2	Q9H3U7	446 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	UNKL	Q9H9P5	680 aa	Known RBP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	SARS2	Q9NP81	518 aa	Known RBP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	TBCCD1	Q9NVR7	557 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	PIH1D1	Q9NWS0	290 aa	Known RBP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	LUZP4	Q9P127	313 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	LRIT1	Q9P2V4	623 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	HESX1	Q9UBX0	185 aa		2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	RGS17	Q9UGC6	210 aa	Predicted RBP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	2.98	□□□□□ -1.93
PUM3-204	ENST00000490444		A0A1W2PPL8	197 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ISM1	B1AKI9	464 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444		M0QYG6	137 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	APAF1	O14727	1248 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	FIBP	O43427	364 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ERN1	O75460	977 aa	Known RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	UNC5C	O95185	931 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	GATA3	P23771	443 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	PEX2	P28328	305 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	SLC11A2	P49281	568 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	RARRES1	P49788	294 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ANXA11	P50995	505 aa	Known RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	NEK3	P51956	506 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	CACNB3	P54284	484 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	SIM1	P81133	766 aa	Predicted RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	FMO1	Q01740	532 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ZNF844	Q08AG5	666 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	DYRK1A	Q13627	763 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	POLD3	Q15054	466 aa	Predicted RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	KIAA0753	Q2KHM9	967 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ALDH1L2	Q3SY69	923 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	CCDC92	Q53HC0	331 aa	Predicted RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	FAM160B1	Q5W0V3	765 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	IL31	Q6EBC2	164 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	DARS2	Q6PI48	645 aa	Known RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444		Q6ZNX1	250 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	CCDC149	Q6ZUS6	474 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ZSCAN30	Q86W11	494 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	MICU3	Q86XE3	530 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ADGRG5	Q8IZF4	528 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	FAM109A	Q8N4B1	249 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	AOPEP	Q8N6M6	819 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	PSD4	Q8NDX1	1056 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	PPHLN1	Q8NEY8	458 aa	Known RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	VPS37A	Q8NEZ2	397 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	SNRNP27	Q8WVK2	155 aa	Known RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	TTC17	Q96AE7	1141 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	SKA1	Q96BD8	255 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	TRIB1	Q96RU8	372 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	CNPPD1	Q9BV87	410 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	GALNT9	Q9HCQ5	603 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ALG13	Q9NP73	1137 aa	Known RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	CLIC5	Q9NZA1	410 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	COL20A1	Q9P218	1284 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	CPNE7	Q9UBL6	633 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	ZNF70	Q9UC06	446 aa	Predicted RBP	2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	PLEKHM1	Q9Y4G2	1056 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	PCDHGB6	Q9Y5F9	930 aa		2.97	□□□□□ -1.93
PUM3-204	ENST00000490444	SPATA31A3	Q5VYP0	1347 aa		2.96	□□□□□ -1.93
PUM3-204	ENST00000490444	TRIM43B	A6NCK2	446 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	PRRT4	C9JH25	899 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	POLRMT	O00411	1230 aa	Known RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	BTN3A1	O00481	513 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	GNAI2	P04899	355 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	TH	P07101	528 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	GRP	P07492	148 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	SRGN	P10124	158 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	SLC7A1	P30825	629 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	VIPR2	P41587	438 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	HAL	P42357	657 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	HNRNPM	P52272	730 aa	Known RBP eCLIP	2.96	□□□□□ -1.94	5e-6	■■■■□ 21
PUM3-204	ENST00000490444	ZNF134	P52741	427 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	SUMO3	P55854	103 aa	Predicted RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	UCP3	P55916	312 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	MRPS35	P82673	323 aa	Known RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	HTRA4	P83105	476 aa	Predicted RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	PIGF	Q07326	219 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	CTBP1	Q13363	440 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	BIRC3	Q13489	604 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	HLX	Q14774	488 aa	Predicted RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	PUM3	Q15397	648 aa	Known RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	CNGA2	Q16280	664 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	CDC37	Q16543	378 aa	Predicted RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	CD300E	Q496F6	205 aa	Predicted RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	C1QTNF12	Q5T7M4	302 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	FOXR2	Q6PJQ5	311 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	MMS22L	Q6ZRQ5	1243 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	CLNK	Q7Z7G1	428 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	MORC1	Q86VD1	984 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	SESTD1	Q86VW0	696 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	LNX2	Q8N448	690 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	PCSK9	Q8NBP7	692 aa	Known RBP	2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	FAM46D	Q8NEK8	389 aa		2.96	□□□□□ -1.94
PUM3-204	ENST00000490444	PJA1	Q8NG27	643 aa		2.96	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms