RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, humanhuman

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-204ENST00000490444 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
PUM3-204ENST00000490444 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
PUM3-204ENST00000490444 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
PUM3-204ENST00000490444 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
PUM3-204ENST00000490444 FOXD1Q16676 465 aa16.2■□□□□ 0.18
PUM3-204ENST00000490444 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
PUM3-204ENST00000490444 MSH5O43196 834 aa15.46■□□□□ 0.07
PUM3-204ENST00000490444 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
PUM3-204ENST00000490444 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
PUM3-204ENST00000490444 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
PUM3-204ENST00000490444 ADRA2BP18089 450 aa14.54□□□□□ -0.08
PUM3-204ENST00000490444 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
PUM3-204ENST00000490444 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
PUM3-204ENST00000490444 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
PUM3-204ENST00000490444 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
PUM3-204ENST00000490444 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
PUM3-204ENST00000490444 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
PUM3-204ENST00000490444 HOXD11P31277 338 aaPredicted RBP12.92□□□□□ -0.34
PUM3-204ENST00000490444 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
PUM3-204ENST00000490444 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
PUM3-204ENST00000490444 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
PUM3-204ENST00000490444 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
PUM3-204ENST00000490444 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
PUM3-204ENST00000490444 POTEHQ6S545 545 aa12.5□□□□□ -0.41
PUM3-204ENST00000490444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
PUM3-204ENST00000490444 DSG3P32926 999 aa12.05□□□□□ -0.48
PUM3-204ENST00000490444 NCBP3Q53F19 620 aaKnown RBP12.01□□□□□ -0.49
PUM3-204ENST00000490444 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
PUM3-204ENST00000490444 CAPN15O75808 1086 aa11.93□□□□□ -0.5
PUM3-204ENST00000490444 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
PUM3-204ENST00000490444 NPM3O75607 178 aaKnown RBP11.8□□□□□ -0.52
PUM3-204ENST00000490444 APLP2Q06481 763 aa11.61□□□□□ -0.55
PUM3-204ENST00000490444 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
PUM3-204ENST00000490444 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
PUM3-204ENST00000490444 ABCB7O75027 752 aa11.57□□□□□ -0.56
PUM3-204ENST00000490444 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
PUM3-204ENST00000490444 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
PUM3-204ENST00000490444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
PUM3-204ENST00000490444 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
PUM3-204ENST00000490444 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
PUM3-204ENST00000490444 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
PUM3-204ENST00000490444 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
PUM3-204ENST00000490444 POLA2Q14181 598 aa11.15□□□□□ -0.62
PUM3-204ENST00000490444 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
PUM3-204ENST00000490444 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
PUM3-204ENST00000490444 HAX1O00165 279 aa11.05□□□□□ -0.64
PUM3-204ENST00000490444 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
PUM3-204ENST00000490444 KCNA4P22459 653 aa10.98□□□□□ -0.65
PUM3-204ENST00000490444 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
PUM3-204ENST00000490444 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
PUM3-204ENST00000490444 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
PUM3-204ENST00000490444 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
PUM3-204ENST00000490444 EVX2Q03828 476 aa10.84□□□□□ -0.67
PUM3-204ENST00000490444 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
PUM3-204ENST00000490444 LHX8Q68G74 356 aa10.7□□□□□ -0.7
PUM3-204ENST00000490444 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
PUM3-204ENST00000490444 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
PUM3-204ENST00000490444 GABBR2O75899 941 aa10.6□□□□□ -0.71
PUM3-204ENST00000490444 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
PUM3-204ENST00000490444 SPDYE2BA6NHP3 402 aa10.54□□□□□ -0.72
PUM3-204ENST00000490444 SPDYE6P0CI01 402 aa10.54□□□□□ -0.72
PUM3-204ENST00000490444 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
PUM3-204ENST00000490444 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
PUM3-204ENST00000490444 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
PUM3-204ENST00000490444 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
PUM3-204ENST00000490444 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
PUM3-204ENST00000490444 FBLN2P98095 1184 aa10.38□□□□□ -0.75
PUM3-204ENST00000490444 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
PUM3-204ENST00000490444 CLCN6P51797 869 aa10.33□□□□□ -0.76
PUM3-204ENST00000490444 SSUH2Q9Y2M2 353 aa10.32□□□□□ -0.76
PUM3-204ENST00000490444 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
PUM3-204ENST00000490444 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
PUM3-204ENST00000490444 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
PUM3-204ENST00000490444 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
PUM3-204ENST00000490444 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
PUM3-204ENST00000490444 CD44P16070 742 aaKnown RBP10.23□□□□□ -0.77
PUM3-204ENST00000490444 DCBLD2Q96PD2 775 aa10.19□□□□□ -0.78
PUM3-204ENST00000490444 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
PUM3-204ENST00000490444 FARP1Q9Y4F1 1045 aaPredicted RBP10.14□□□□□ -0.79
PUM3-204ENST00000490444 POTEMA6NI47 508 aa10.1□□□□□ -0.79
PUM3-204ENST00000490444 OTUD5Q96G74 571 aa10.1□□□□□ -0.79
PUM3-204ENST00000490444 PABPN1Q86U42 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
PUM3-204ENST00000490444 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
PUM3-204ENST00000490444 ZBTB22O15209 634 aa10.06□□□□□ -0.8
PUM3-204ENST00000490444 PCDH10Q9P2E7 1040 aa10.06□□□□□ -0.8
PUM3-204ENST00000490444 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
PUM3-204ENST00000490444 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
PUM3-204ENST00000490444 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
PUM3-204ENST00000490444 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
PUM3-204ENST00000490444 CREBZFQ9NS37 354 aa9.82□□□□□ -0.84
PUM3-204ENST00000490444 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
PUM3-204ENST00000490444 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
PUM3-204ENST00000490444 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
PUM3-204ENST00000490444 LCE2DQ5TA82 110 aaPredicted RBP9.77□□□□□ -0.85
PUM3-204ENST00000490444 C7P10643 843 aa9.76□□□□□ -0.85
PUM3-204ENST00000490444 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
PUM3-204ENST00000490444 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
PUM3-204ENST00000490444 SLC39A7Q92504 469 aa9.75□□□□□ -0.85
PUM3-204ENST00000490444 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
PUM3-204ENST00000490444 ASTLQ6HA08 431 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms