RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 VCPIP1Q96JH7 1222 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 CEP170P1Q96L14 293 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 ATP6V1G3Q96LB4 118 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 ZIM3Q96PE6 472 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 MDFIQ99750 246 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 ERP44Q9BS26 406 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 TINF2Q9BSI4 451 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 GPR88Q9GZN0 384 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 TMEM117Q9H0C3 514 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 LMAN2LQ9H0V9 348 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 STMN4Q9H169 189 aaPredicted RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 UPF3AQ9H1J1 476 aaKnown RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 RPAP3Q9H6T3 665 aaPredicted RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 CNOT10Q9H9A5 744 aaKnown RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 TMBIM4Q9HC24 238 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 RAVER2Q9HCJ3 691 aaKnown RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 NRBP2Q9NSY0 501 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 RNF146Q9NTX7 359 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 CTTNBP2NLQ9P2B4 639 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 WRAP73Q9P2S5 460 aaPredicted RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 MTRF1LQ9UGC7 380 aaKnown RBP5.38□□□□□ -1.55
PTPRK-213ENST00000490332 FBXO40Q9UH90 709 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 GTF3C4Q9UKN8 822 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 ADAMTS5Q9UNA0 930 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 TANC1Q9C0D5 1861 aa5.38□□□□□ -1.55
PTPRK-213ENST00000490332 IGSF10Q6WRI0 2623 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 A0A087WUV0 522 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 FAM229AH3BQW9 127 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 NFIBO00712 420 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 NDC80O14777 642 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 EIF3HO15372 352 aaKnown RBP eCLIP5.37□□□□□ -1.555e-7■□□□□ 8.5
PTPRK-213ENST00000490332 SLC16A4O15374 487 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 DDX3YO15523 660 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 EXTL3O43909 919 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 TBX10O75333 385 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CYP1A2P05177 515 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 TRIM49P0CI25 452 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 TRIM49CP0CI26 452 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 VCAM1P19320 739 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 EIF2AK2P19525 551 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 ATP4AP20648 1035 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 ABCB4P21439 1286 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CTNNA1P35221 906 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 USP8P40818 1118 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 RFC5P40937 340 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 NPTX2P47972 431 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 FNTAP49354 379 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 NDUFV1P49821 464 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 PDE6CP51160 858 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 DNA2P51530 1060 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 RWDD2BP57060 319 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 PCBP4P57723 403 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 GJA9P57773 515 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 RNASE9P60153 205 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 WDR5P61964 334 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 GNGT1P63211 74 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 DR1Q01658 176 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CDR2Q01850 454 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 POU5F1Q01860 360 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CAV1Q03135 178 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 DLX2Q07687 328 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 PPP3CAQ08209 521 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 STRN3Q13033 797 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 GPM6BQ13491 265 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 ITGA7Q13683 1181 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 BAATQ14032 418 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 SURF1Q15526 300 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 SNRNP35Q16560 246 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CEP85LQ5SZL2 805 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 LIN9Q5TKA1 542 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 GJB7Q6PEY0 223 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 NSMFQ6X4W1 530 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CYFIP1Q7L576 1253 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 HOOK3Q86VS8 718 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 SUMF1Q8NBK3 374 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 TSEN2Q8NCE0 465 aaKnown RBP5.37□□□□□ -1.55
PTPRK-213ENST00000490332 BBOF1Q8ND07 529 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 DNERQ8NFT8 737 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 RHBDD1Q8TEB9 315 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 POMGNT1Q8WZA1 660 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CENPTQ96BT3 561 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 MSLNLQ96KJ4 702 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 GDAP1L1Q96MZ0 367 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 ZSWIM1Q9BR11 485 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 CBWD1Q9BRT8 395 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 TEX13BQ9BXU2 312 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 THAP2Q9H0W7 228 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 PCIF1Q9H4Z3 704 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 MROH8Q9H579 483 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 ACAD9Q9H845 621 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 ATP6V0A4Q9HBG4 840 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 POLD4Q9HCU8 107 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 RAB20Q9NX57 234 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 EHD2Q9NZN4 543 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 COL20A1Q9P218 1284 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 GABBR1Q9UBS5 961 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 SLC9A2Q9UBY0 812 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 PCYOX1Q9UHG3 505 aa5.37□□□□□ -1.55
PTPRK-213ENST00000490332 RSPH14Q9UHP6 348 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms