RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 MRPL47Q9HD33 250 aaKnown RBP13.91□□□□□ -0.18
TNXB-206ENST00000490077 FAM49BQ9NUQ9 324 aa13.91□□□□□ -0.18
TNXB-206ENST00000490077 XPO7Q9UIA9 1087 aaKnown RBP13.91□□□□□ -0.18
TNXB-206ENST00000490077 SSC5DA1L4H1 1573 aa13.91□□□□□ -0.18
TNXB-206ENST00000490077 CLNS1AP54105 237 aaKnown RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 TRPC3Q13507 836 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 JADE1Q6IE81 842 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 SCUBE3Q8IX30 993 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 NAT8LQ8N9F0 302 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 FAM13CQ8NE31 585 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 CPSF3Q9UKF6 684 aaKnown RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 PAPPA2Q9BXP8 1791 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 FAM237BA0A1B0GVD1 139 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 CFAP69A5D8W1 941 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 KBTBD13C9JR72 458 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 IRF6O14896 467 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 EDF1O60869 148 aaKnown RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 TJP3O95049 919 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 UNC5CO95185 931 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 RBP3P10745 1247 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 PYGBP11216 843 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 ADORA2AP29274 412 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 GTF2A2P52657 109 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 STAT4Q14765 748 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 ENOSF1Q7L5Y1 443 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 CTU1Q7Z7A3 348 aaKnown RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 ALYREFQ86V81 257 aaKnown RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 SPATA18Q8TC71 538 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 DCAKDQ8WVC6 231 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 CLPTM1LQ96KA5 538 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 ACAP3Q96P50 834 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 TIPINQ9BVW5 301 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 DENND2DQ9H6A0 471 aaPredicted RBP13.9□□□□□ -0.18
TNXB-206ENST00000490077 SLC24A3Q9HC58 644 aa13.9□□□□□ -0.18
TNXB-206ENST00000490077 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.9□□□□□ -0.18
TNXB-206ENST00000490077 GBP2P32456 591 aaPredicted RBP13.89□□□□□ -0.19
TNXB-206ENST00000490077 SNRPFP62306 86 aaKnown RBP13.89□□□□□ -0.19
TNXB-206ENST00000490077 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 ARHGEF18Q6ZSZ5 1173 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 GIMAP7Q8NHV1 300 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 CCDC110Q8TBZ0 833 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 SLC13A1Q9BZW2 595 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 NSRP1Q9H0G5 558 aaKnown RBP13.89□□□□□ -0.19
TNXB-206ENST00000490077 SYNCQ9H7C4 482 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 ZC3H11AO75152 810 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNXB-206ENST00000490077 MICAL2O94851 1124 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 SORBS2O94875 1100 aaKnown RBP13.89□□□□□ -0.19
TNXB-206ENST00000490077 BPIFB4P59827 614 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
TNXB-206ENST00000490077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNXB-206ENST00000490077 ZNF677Q86XU0 584 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 DTX3LQ8TDB6 740 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 SMC6Q96SB8 1091 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 CDT1Q9H211 546 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 SCN1AP35498 2009 aa13.89□□□□□ -0.19
TNXB-206ENST00000490077 TCRBV9S1A1TA0A576 114 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 M0QYV0 167 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
TNXB-206ENST00000490077 TOM1L1O75674 476 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 TCEA3O75764 348 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 HMGCRP04035 888 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 IL4RP24394 825 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 ABCG1P45844 678 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 IL9RQ01113 521 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
TNXB-206ENST00000490077 NEDD9Q14511 834 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 R3HDM1Q15032 1099 aaKnown RBP13.88□□□□□ -0.19
TNXB-206ENST00000490077 DUOXA2Q1HG44 320 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 GNPTABQ3T906 1256 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 FAM102AQ5T9C2 384 aaPredicted RBP13.88□□□□□ -0.19
TNXB-206ENST00000490077 HHATQ5VTY9 493 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 PYROXD2Q8N2H3 581 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNXB-206ENST00000490077 EFCAB3Q8N7B9 438 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 TMEM35BQ8NCS4 154 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 MIS12Q9H081 205 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 KCNK13Q9HB14 408 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 C15orf41Q9Y2V0 281 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 SNCAIPQ9Y6H5 919 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 A0A087WZ62 844 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 MAFO75444 373 aaPredicted RBP13.88□□□□□ -0.19
TNXB-206ENST00000490077 ZNF286BP0CG31 522 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 SERPINB3P29508 390 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 GBP1P32455 592 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 CDH6P55285 790 aa13.88□□□□□ -0.19
TNXB-206ENST00000490077 YWHAGP61981 247 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNXB-206ENST00000490077 CTC1Q2NKJ3 1217 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms