RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 GALK1P51570 392 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 NOP14P78316 857 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PDGFRLQ15198 375 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 LPAL2Q16609 132 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 EML3Q32P44 896 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 KMT5BQ4FZB7 885 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TDRD10Q5VZ19 366 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 DENND5BQ6ZUT9 1274 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 LONP2Q86WA8 852 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SLC9A9Q8IVB4 645 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CEP57L1Q8IYX8 460 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 OR6B3Q8NGW1 331 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 EZH1Q92800 747 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ELMO3Q96BJ8 720 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 C8orf48Q96LL4 319 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 B3GNT5Q9BYG0 378 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 LINC00597Q9H2U6 94 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SNX25Q9H3E2 840 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ECT2Q9H8V3 914 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 VRTNQ9H8Y1 702 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 F8VP50 259 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 VNN1O95497 513 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 EGFP01133 1207 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 CKMP06732 381 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 HDCP19113 662 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ATICP31939 592 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 CDH8P55286 799 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 CC2D1AQ6P1N0 951 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 FSIP1Q8NA03 581 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SH3RF2Q8TEC5 729 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RNF38Q9H0F5 515 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 POLR3BQ9NW08 1133 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 DUS2Q9NX74 493 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 NXF1Q9UBU9 619 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ARHGAP26Q9UNA1 814 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 WNT6Q9Y6F9 365 aa20.7■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ZNF840PA6NDX5 716 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 CLDN5O00501 218 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 TRIM66O15016 1216 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 TNNC1P63316 161 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 DLG4P78352 724 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 GRSF1Q12849 480 aaKnown RBP eCLIP20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PSMD2Q13200 908 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 TRPC3Q13507 836 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RSPO4Q2I0M5 234 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 HEATR6Q6AI08 1181 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 LAIR1Q6GTX8 287 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PAQR9Q6ZVX9 377 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 GPR161Q8N6U8 529 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ZNF518BQ9C0D4 1074 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SDCBP2Q9H190 292 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SMYD3Q9H7B4 428 aa20.69■□□□□ 0.9
TNFRSF1B-202ENST00000489921 FAM237AA0A1B0GTK4 181 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 CNR2P34972 360 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PUM1Q14671 1186 aaKnown RBP eCLIP20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 C1orf220Q5T0J3 134 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 WDR5BQ86VZ2 330 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 B3GALNT2Q8NCR0 500 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 GOLGA5Q8TBA6 731 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SYAP1Q96A49 352 aaPredicted RBP20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 TRPM5Q9NZQ8 1165 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RALGAPA1Q6GYQ0 2036 aa20.68■□□□□ 0.9
TNFRSF1B-202ENST00000489921 A8MXQ7 604 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PDXKO00764 312 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RNF40O75150 1001 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 OLFM2O95897 454 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ANXA13P27216 316 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RAP1GAPP47736 663 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SIM2Q14190 667 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 KCNB1Q14721 858 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 GAB4Q2WGN9 574 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 CPA6Q8N4T0 437 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SECISBP2LQ93073 1101 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 P2RY13Q9BPV8 354 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 EXOC1Q9NV70 894 aa20.67■□□□□ 0.9
TNFRSF1B-202ENST00000489921 MED19A0JLT2 244 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 OAS1P00973 400 aaKnown RBP20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RETP07949 1114 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PRR29P0C7W0 189 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PFKLP17858 780 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 DRD1P21728 446 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PXNP49023 591 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 NDUFA8P51970 172 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 AP3M2P53677 418 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SLC7A9P82251 487 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SPEM2Q0P670 501 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 TAF10Q12962 218 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 NCOA4Q13772 614 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PRR23BQ6ZRT6 265 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 DGLUCYQ7Z3D6 616 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 TTC16Q8NEE8 873 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ATP2A3Q93084 1043 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 KCNK16Q96T55 309 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ELOVL4Q9GZR5 314 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 USP25Q9UHP3 1055 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 GMEB2Q9UKD1 530 aa20.66■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SPAG17Q6Q759 2223 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 MYOFQ9NZM1 2061 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ANTXRLA6NF34 631 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 LEFTY2O00292 366 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms