RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 C4orf50Q6ZRC1 276 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 SV2BQ7L1I2 683 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 CCDC26Q8TAB7 109 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 MYLPFQ96A32 169 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 CLIC6Q96NY7 704 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 SYT15Q9BQS2 421 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 FGFBP2Q9BYJ0 223 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 R3HCC1Q9Y3T6 440 aaKnown RBP18.16■□□□□ 0.5
TOP3B-217ENST00000489581 CACNA1EQ15878 2313 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 IGF2RP11717 2491 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 LEFTY2O00292 366 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 PDGFRBP09619 1106 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 GRIK1P39086 918 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 USP46P62068 366 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 IRX4P78413 519 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 ZNF252P-AS1Q0IIN9 211 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 FOXC1Q12948 553 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 GAB4Q2WGN9 574 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 CYP2U1Q7Z449 544 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 RASSF3Q86WH2 238 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 MDGA1Q8NFP4 955 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 OR5B17Q8NGF7 314 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 TMEM9BQ9NQ34 198 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 CRTAC1Q9NQ79 661 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 TRPM5Q9NZQ8 1165 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 CDH9Q9ULB4 789 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 MMP17Q9ULZ9 603 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 CEP192Q8TEP8 1941 aa18.15■□□□□ 0.5
TOP3B-217ENST00000489581 CDX4O14627 284 aaPredicted RBP18.14■□□□□ 0.49
TOP3B-217ENST00000489581 PRPF6O94906 941 aaKnown RBP18.14■□□□□ 0.49
TOP3B-217ENST00000489581 SPINK2P20155 84 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 DHPSP49366 369 aaPredicted RBP18.14■□□□□ 0.49
TOP3B-217ENST00000489581 CYP27A1Q02318 531 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 MYO1EQ12965 1108 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 CRY1Q16526 586 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 VSTM1Q6UX27 236 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 DPH6Q7L8W6 267 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 C11orf74Q86VG3 221 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 SFTPA1Q8IWL2 248 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 GPD1LQ8N335 351 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 KBTBD7Q8WVZ9 684 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 PIGKQ92643 395 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 HPDLQ96IR7 371 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 SPATA17Q96L03 361 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 CNOT6LQ96LI5 555 aaKnown RBP18.14■□□□□ 0.49
TOP3B-217ENST00000489581 OLFML3Q9NRN5 406 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 INTS13Q9NVM9 706 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
TOP3B-217ENST00000489581 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.14■□□□□ 0.49
TOP3B-217ENST00000489581 PTPRJQ12913 1337 aa18.14■□□□□ 0.49
TOP3B-217ENST00000489581 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
TOP3B-217ENST00000489581 SCAMP3O14828 347 aaKnown RBP18.13■□□□□ 0.49
TOP3B-217ENST00000489581 TOP3BO95985 862 aaKnown RBP18.13■□□□□ 0.49
TOP3B-217ENST00000489581 CYP17A1P05093 508 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 HNRNPLP14866 589 aaKnown RBP eCLIP18.13■□□□□ 0.49
TOP3B-217ENST00000489581 ANXA13P27216 316 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 SLC6A11P48066 632 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 PDE6CP51160 858 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 UAP1L1Q3KQV9 507 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 UNQ6494/PRO21346Q6UXR6 183 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 TMEM92Q6UXU6 159 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 DENND5BQ6ZUT9 1274 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 LIMS2Q7Z4I7 341 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 FILIP1Q7Z7B0 1213 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 ADGRG2Q8IZP9 1017 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 RLN3Q8WXF3 142 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 RNF38Q9H0F5 515 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 PANK4Q9NVE7 773 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 SMPD4Q9NXE4 827 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 CIZ1Q9ULV3 898 aaPredicted RBP18.13■□□□□ 0.49
TOP3B-217ENST00000489581 SRPRBQ9Y5M8 271 aaKnown RBP18.13■□□□□ 0.49
TOP3B-217ENST00000489581 ADAMTS9Q9P2N4 1935 aa18.13■□□□□ 0.49
TOP3B-217ENST00000489581 TNRC6BQ9UPQ9 1833 aaKnown RBP18.12■□□□□ 0.49
TOP3B-217ENST00000489581 ABL1P00519 1130 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 TNNC2P02585 160 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 TIE1P35590 1138 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 TXLNAP40222 546 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 MRPS21P82921 87 aaKnown RBP18.12■□□□□ 0.49
TOP3B-217ENST00000489581 MESP2Q0VG99 397 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 ALCAMQ13740 583 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 DHCR24Q15392 516 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 MAPRE1Q15691 268 aaKnown RBP18.12■□□□□ 0.49
TOP3B-217ENST00000489581 ALLCQ8N6M5 410 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 PCED1BQ96HM7 432 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 MMS19Q96T76 1030 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 ZMIZ1Q9ULJ6 1067 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 CPQQ9Y646 472 aa18.12■□□□□ 0.49
TOP3B-217ENST00000489581 ZNF840PA6NDX5 716 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 ALDH1A2O94788 518 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 KLF8O95600 359 aaPredicted RBP18.11■□□□□ 0.49
TOP3B-217ENST00000489581 CEACAM1P13688 526 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 PFKLP17858 780 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 CSRP1P21291 193 aaKnown RBP18.11■□□□□ 0.49
TOP3B-217ENST00000489581 WARSP23381 471 aaKnown RBP18.11■□□□□ 0.49
TOP3B-217ENST00000489581 SLC7A9P82251 487 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
TOP3B-217ENST00000489581 EMC10Q5UCC4 262 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 CBWD2Q8IUF1 395 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms