RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TCEANC2Q96MN5 208 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 SLC26A6Q9BXS9 759 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 ABI2Q9NYB9 513 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-233ENST00000489352 A0A1B0GVT2 93 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 BTBD18B2RXH4 712 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 RFPL3O75679 317 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 ADH1CP00326 375 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 CYP17A1P05093 508 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 HAPLN1P10915 354 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-233ENST00000489352 HARSP12081 509 aaKnown RBP12.46□□□□□ -0.41
HDAC6-233ENST00000489352 XRCC6P12956 609 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC6-233ENST00000489352 HDCP19113 662 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 NDUFV2P19404 249 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 CD6P30203 668 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 NTSR1P30989 418 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 TNFSF9P41273 254 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 PDE6CP51160 858 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 CLDN6P56747 220 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 HES3Q5TGS1 186 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 BTBD8Q5XKL5 378 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 THEM5Q8N1Q8 247 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 ERLEC1Q96DZ1 483 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 MTMR9Q96QG7 549 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.41
HDAC6-233ENST00000489352 GPR174Q9BXC1 333 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 CDT1Q9H211 546 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 RWDD1Q9H446 243 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-233ENST00000489352 RPF1Q9H9Y2 349 aaKnown RBP12.46□□□□□ -0.41
HDAC6-233ENST00000489352 TUBGCP4Q9UGJ1 667 aa12.46□□□□□ -0.41
HDAC6-233ENST00000489352 A0A087WWV3 80 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 A0A0A0MRY4 1105 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 ENC1O14682 589 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 SLC9A3R1O14745 358 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 TERTO14746 1132 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 KLK10O43240 276 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 AFPP02771 609 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 NFICP08651 508 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 HMGA1P17096 107 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 CCT8P50990 548 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 RIPPLY3P57055 190 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 NUCB1Q02818 461 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 DHCR24Q15392 516 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 TEAD4Q15561 434 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 DCAF12L1Q5VU92 463 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 CREB3L3Q68CJ9 461 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 NEK8Q86SG6 692 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 METTL23Q86XA0 190 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 DHX40Q8IX18 779 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 ADGRG2Q8IZP9 1017 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 CADM4Q8NFZ8 388 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 KCNE4Q8WWG9 221 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 TSC1Q92574 1164 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 HAS1Q92839 578 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 RNF26Q9BY78 433 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
HDAC6-233ENST00000489352 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 USP9YO00507 2555 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-233ENST00000489352 E2F8A0AVK6 867 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 XPOTO43592 962 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 LDOC1O95751 146 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 MCF2P10911 925 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 ADH5P11766 374 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 CSNK1EP49674 416 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 ATP2C1P98194 919 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 ZC2HC1CQ53FD0 456 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 CHPFQ8IZ52 775 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 DCP1BQ8IZD4 617 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 TOE1Q96GM8 510 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 SENP8Q96LD8 212 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 SLC22A12Q96S37 553 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 ACO2Q99798 780 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 HSD17B14Q9BPX1 270 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 KIFC3Q9BVG8 833 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 MRPL4Q9BYD3 311 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 ZCWPW1Q9H0M4 648 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 EIF2B4Q9UI10 523 aaKnown RBP12.44□□□□□ -0.42
HDAC6-233ENST00000489352 PCDHB6Q9Y5E3 794 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 PCDHB5Q9Y5E4 795 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 C2CD3Q4AC94 2353 aa12.44□□□□□ -0.42
HDAC6-233ENST00000489352 TP53BP1Q12888 1972 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-233ENST00000489352 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 PCDHGA12O60330 932 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 TCF3P15923 654 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 CR2P20023 1033 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 GLDCP23378 1020 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 BNC1Q01954 994 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 MESP2Q0VG99 397 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 GAB4Q2WGN9 574 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 C10orf76Q5T2E6 689 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 KIAA1614Q5VZ46 1190 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 SMC5Q8IY18 1101 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms