RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 KCNB1Q14721 858 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 PDGFRLQ15198 375 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 FAM26FQ5R3K3 315 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 TCEAL6Q6IPX3 200 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 C4orf50Q6ZRC1 276 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 CPA6Q8N4T0 437 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 ZNF507Q8TCN5 953 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 NETO1Q8TDF5 533 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 GAB3Q8WWW8 586 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 CD101Q93033 1021 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 TCEAL3Q969E4 200 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 SNX25Q9H3E2 840 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 ZDHHC4Q9NPG8 344 aa16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 NXF1Q9UBU9 619 aaKnown RBP16.98■□□□□ 0.31
ERGIC3-217ENST00000488935 LEFTY2O00292 366 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 SDHBP21912 280 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 MAGEA11P43364 429 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 RAP1GAPP47736 663 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 SLC6A11P48066 632 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 CYP24A1Q07973 514 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 CUL4BQ13620 913 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 WDR72Q3MJ13 1102 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 AASDHQ4L235 1098 aaPredicted RBP16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 C2orf27AQ580R0 203 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 WDR49Q8IV35 697 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 CCDC33Q8N5R6 958 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 FUBP3Q96I24 572 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 BACH2Q9BYV9 841 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 TPSD1Q9BZJ3 242 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 ZNF518BQ9C0D4 1074 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 ZMYM5Q9UJ78 669 aa16.97■□□□□ 0.31
ERGIC3-217ENST00000488935 CUTAO60888 179 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 KRT37O76014 449 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 CLSTN1O94985 981 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 PTPN1P18031 435 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 DRD1P21728 446 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 HOXA6P31267 233 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 ORC1Q13415 861 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 DMC1Q14565 340 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 GAB4Q2WGN9 574 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 SCARA5Q6ZMJ2 495 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 DENND5BQ6ZUT9 1274 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 DPH6Q7L8W6 267 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 CACNA2D4Q7Z3S7 1137 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 FILIP1Q7Z7B0 1213 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 TTC30AQ86WT1 665 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 MYCBPAPQ8TBZ2 947 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 FNBP1Q96RU3 617 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 CGRRF1Q99675 332 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 C7orf25Q9BPX7 421 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 SMYD3Q9H7B4 428 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 TRPM5Q9NZQ8 1165 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 MORC2Q9Y6X9 1032 aaPredicted RBP16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 THADAQ6YHU6 1953 aa16.96■□□□□ 0.31
ERGIC3-217ENST00000488935 MYO18AQ92614 2054 aaKnown RBP16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 MYH10P35580 1976 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 CACNA1BQ00975 2339 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 EIF3DO15371 548 aaKnown RBP eCLIP16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 LRP3O75074 770 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 ATG13O75143 517 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 PPP6R2O75170 966 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 ANXA13P27216 316 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 OPRD1P41143 372 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 DGKEP52429 567 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 TAF10Q12962 218 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 PKP1Q13835 747 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 PSMD6Q15008 389 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 SURF1Q15526 300 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 XXYLT1Q8NBI6 393 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 SPATA17Q96L03 361 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 CHORDC1Q9UHD1 332 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 PCDHA7Q9UN72 937 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 ARHGAP26Q9UNA1 814 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 CPQQ9Y646 472 aa16.95■□□□□ 0.3
ERGIC3-217ENST00000488935 ZNF840PA6NDX5 716 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 A8MXQ7 604 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 K7EQS6 105 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 KIAA0391O15091 583 aaKnown RBP16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 EPN2O95208 641 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 HNRNPLP14866 589 aaKnown RBP eCLIP16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 TNNC1P63316 161 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 AMPD2Q01433 879 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 PLK5Q496M5 336 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 VSTM1Q6UX27 236 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 C12orf40Q86WS4 652 aa16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 C12orf50Q8NA57 414 aaPredicted RBP16.94■□□□□ 0.3
ERGIC3-217ENST00000488935 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms