RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, human

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCMH1-215	ENST00000488592	COMMD8	Q9NX08	183 aa		13.38	□□□□□ -0.27
SCMH1-215	ENST00000488592	DUS2	Q9NX74	493 aa	Known RBP	13.38	□□□□□ -0.27
SCMH1-215	ENST00000488592	TRPM5	Q9NZQ8	1165 aa		13.38	□□□□□ -0.27
SCMH1-215	ENST00000488592	CDV3	Q9UKY7	258 aa	Known RBP	13.38	□□□□□ -0.27
SCMH1-215	ENST00000488592	OTOL1	A6NHN0	477 aa	Predicted RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	SLC9A3R1	O14745	358 aa	Predicted RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	MAPK13	O15264	365 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	ACTN4	O43707	911 aa	Known RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	EXOC3	O60645	756 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	RTN3	O95197	1032 aa	Predicted RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	KIF20A	O95235	890 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	P4HA1	P13674	534 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	HDC	P19113	662 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	BDNF	P23560	247 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	GJA4	P35212	333 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	GRIK1	P39086	918 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	FNTB	P49356	437 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	TUB	P50607	506 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	PSMC1	P62191	440 aa	Known RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	CYP27A1	Q02318	531 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	CSRP2	Q16527	193 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	SDHAF4	Q5VUM1	108 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	B3GALNT2	Q8NCR0	500 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	RIN3	Q8TB24	985 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	NETO1	Q8TDF5	533 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	PARD3B	Q8TEW8	1205 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	GAB3	Q8WWW8	586 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	TAF4B	Q92750	862 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	CCDC127	Q96BQ5	260 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	TNIP3	Q96KP6	325 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	SLITRK1	Q96PX8	696 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	GZF1	Q9H116	711 aa	Predicted RBP	13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	TRPC7	Q9HCX4	862 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	EXOC1	Q9NV70	894 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	DMAC2	Q9NW81	257 aa		13.37	□□□□□ -0.27
SCMH1-215	ENST00000488592	SDK1	Q7Z5N4	2213 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	FAM237A	A0A1B0GTK4	181 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	ZNF840P	A6NDX5	716 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	PDXK	O00764	312 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	IKBKB	O14920	756 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	CLIC2	O15247	247 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	HR	O43593	1189 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	KLRC4	O43908	158 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	ATP2C2	O75185	946 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	OAS1	P00973	400 aa	Known RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	CST3	P01034	146 aa	Predicted RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	RPN1	P04843	607 aa	Known RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	ARSA	P15289	507 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	PTPN1	P18031	435 aa	Known RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	CMA1	P23946	247 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	EIF2D	P41214	584 aa	Known RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	CUL4B	Q13620	913 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	NFIL3	Q16649	462 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	MDH1B	Q5I0G3	518 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SNX30	Q5VWJ9	437 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SCARA3	Q6AZY7	606 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	TRIM68	Q6AZZ1	485 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	PRR23B	Q6ZRT6	265 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SYT13	Q7L8C5	426 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	C11orf74	Q86VG3	221 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	GPIHBP1	Q8IV16	184 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	NELFCD	Q8IXH7	590 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	OR6B3	Q8NGW1	331 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	TMC2	Q8TDI7	906 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SH3RF2	Q8TEC5	729 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	CD101	Q93033	1021 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	FAM84A	Q96KN4	292 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SLC22A12	Q96S37	553 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	MRPL45	Q9BRJ2	306 aa	Known RBP	13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SLC39A2	Q9NP94	309 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	EBF1	Q9UH73	591 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	USP18	Q9UMW8	372 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	SLC8A2	Q9UPR5	921 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	PCDHGA5	Q9Y5G8	931 aa		13.36	□□□□□ -0.27
SCMH1-215	ENST00000488592	PLXND1	Q9Y4D7	1925 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	C2orf78	A6NCI8	922 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592		F8VP50	259 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	HCRT	O43612	131 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	RNF40	O75150	1001 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	PDGFRB	P09619	1106 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	TRIM21	P19474	475 aa	Known RBP	13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	LIMK1	P53667	647 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	CCDC142	Q17RM4	750 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	ZNF699	Q32M78	642 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	HSF5	Q4G112	596 aa	Predicted RBP	13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	ZNF667	Q5HYK9	610 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	TDRD10	Q5VZ19	366 aa	Known RBP	13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	CACNA2D4	Q7Z3S7	1137 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	RDH13	Q8NBN7	331 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	KIAA0895	Q8NCT3	520 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	STKLD1	Q8NE28	680 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	TTC8	Q8TAM2	541 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	DDX1	Q92499	740 aa	Known RBP	13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	ZNF516	Q92618	1163 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	OTUB2	Q96DC9	234 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	SMARCD1	Q96GM5	515 aa		13.35	□□□□□ -0.27
SCMH1-215	ENST00000488592	ZC3H10	Q96K80	434 aa	Known RBP	13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms