RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 CPA4Q9UI42 421 aa15.9■□□□□ 0.14
PKD1-220ENST00000487932 TEX28O15482 410 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.14
PKD1-220ENST00000487932 ALBP02768 609 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 RHOCP08134 193 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 GRK2P25098 689 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 ACOT1Q86TX2 421 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 GATAD2AQ86YP4 633 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 OR2W6PQ8NHA6 318 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 CAMKK2Q96RR4 588 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 TARS2Q9BW92 718 aaKnown RBP15.89■□□□□ 0.14
PKD1-220ENST00000487932 DEFB129Q9H1M3 183 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 ADAM21Q9UKJ8 722 aa15.89■□□□□ 0.14
PKD1-220ENST00000487932 TBKBP1A7MCY6 615 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 EGFRP00533 1210 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 NOS3P29474 1203 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 DEFA1P59665 94 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 DEFA3P59666 94 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 DYNC1I2Q13409 638 aaKnown RBP15.89■□□□□ 0.13
PKD1-220ENST00000487932 GJB7Q6PEY0 223 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 ADI1Q9BV57 179 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 NPC1L1Q9UHC9 1359 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 PDZK1P1A8MUH7 402 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 A8MX80 341 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 DPEP1P16444 411 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 SYDE1Q6ZW31 735 aaPredicted RBP15.89■□□□□ 0.13
PKD1-220ENST00000487932 MB21D2Q8IYB1 491 aaPredicted RBP15.89■□□□□ 0.13
PKD1-220ENST00000487932 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 SP100P23497 879 aaPredicted RBP15.89■□□□□ 0.13
PKD1-220ENST00000487932 DMTNQ08495 405 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 MTF1Q14872 753 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 TRIP10Q15642 601 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 EMILIN2Q9BXX0 1053 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 EIF2S1P05198 315 aaKnown RBP15.89■□□□□ 0.13
PKD1-220ENST00000487932 NUDT2P50583 147 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 CSGALNACT1Q8TDX6 532 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 IARS2Q9NSE4 1012 aaKnown RBP15.89■□□□□ 0.13
PKD1-220ENST00000487932 TRPM5Q9NZQ8 1165 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 ARHGEF12Q9NZN5 1544 aa15.89■□□□□ 0.13
PKD1-220ENST00000487932 UBTFL6P0CB48 400 aaPredicted RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 HSMCR30P0CW71 290 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ZNF543Q08ER8 600 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ANKRD13AQ8IZ07 590 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 SH3GL2Q99962 352 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 CLPBQ9H078 707 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 USP6P35125 1406 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 PEX1O43933 1283 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ANXA9O76027 345 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ORC2Q13416 577 aaPredicted RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 HERC6Q8IVU3 1022 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 RMND5AQ9H871 391 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 RSAD1Q9HA92 442 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 MIEF1Q9NQG6 463 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 PLEKHG1Q9ULL1 1385 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 GOLGA8TH3BQL2 631 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 BFSP2Q13515 415 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 CUL4AQ13619 759 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 CYP4Z1Q86W10 505 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 CMTM5Q96DZ9 223 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 RHBGQ9H310 441 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 LRRC14BA6NHZ5 514 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 IGKV5-2P06315 115 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 KCNK16Q96T55 309 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 SAMD9Q5K651 1589 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 GEMP55040 296 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 NBPF9Q3BBW0 867 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 SLC44A4Q53GD3 710 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 SCARA3Q6AZY7 606 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 LINC00523Q86TU6 105 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 GPRASP2Q96D09 838 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ZNF333Q96JL9 665 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 APOL2Q9BQE5 337 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 MXRA8Q9BRK3 442 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 ARL2BPQ9Y2Y0 163 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 USP27XA6NNY8 438 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 B2RBV5 119 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ITGAXP20702 1163 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 CLK2P49760 499 aaKnown RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 CCR4P51679 360 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 ITGA8P53708 1063 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 DNAL1Q4LDG9 190 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 TYW3Q6IPR3 259 aaKnown RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 C11orf88Q6PI97 169 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 GTF3C2Q8WUA4 911 aaPredicted RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 DNAJC1Q96KC8 554 aaKnown RBP15.88■□□□□ 0.13
PKD1-220ENST00000487932 CCDC134Q9H6E4 229 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 WDR41Q9HAD4 459 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 INTS13Q9NVM9 706 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 HPS5Q9UPZ3 1129 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 KLHL20Q9Y2M5 609 aa15.88■□□□□ 0.13
PKD1-220ENST00000487932 PHF20L1A8MW92 1017 aa15.87■□□□□ 0.13
PKD1-220ENST00000487932 COMTP21964 271 aa15.87■□□□□ 0.13
PKD1-220ENST00000487932 MAGEA4P43358 317 aa15.87■□□□□ 0.13
PKD1-220ENST00000487932 ATP2C1P98194 919 aaPredicted RBP15.87■□□□□ 0.13
PKD1-220ENST00000487932 PRKAA1Q13131 559 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms