RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MCM3P25205 808 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 TNFRSF8P28908 595 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 PCSK1P29120 753 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 GJA8P48165 433 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 MRPS25P82663 173 aaKnown RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 SLC6A3Q01959 620 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 SLC25A11Q02978 314 aaKnown RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 ACAP1Q15027 740 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 CLEC20AQ6ZU45 233 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 KLHL7Q8IXQ5 586 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 PRELID2Q8N945 189 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 ANKLE1Q8NAG6 615 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 HASPINQ8TF76 798 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 DSEQ9UL01 958 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 GOLGA6L10A0A0M3HER8 536 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 MYBPHLA2RUH7 354 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 CLDN5O00501 218 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 GLI1P08151 1106 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 FLT3P36888 993 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ACADSBP45954 432 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 SLC7A5Q01650 507 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PPP2R5EQ16537 467 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 TXNRD3NBQ6F5E7 133 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 FAM171BQ6P995 826 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 SLC26A9Q7LBE3 791 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ARCQ7LC44 396 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 FAM35AQ86V20 835 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PIGZQ86VD9 579 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 SCUBE3Q8IX30 993 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 C12orf50Q8NA57 414 aaPredicted RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 MYCBPAPQ8TBZ2 947 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 KCTD13Q8WZ19 329 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PCED1BQ96HM7 432 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 CASD1Q96PB1 797 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 HERPUD2Q9BSE4 406 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 KRT82Q9NSB4 513 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 DNAJB4Q9UDY4 337 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ARHGEF37A1IGU5 675 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PHF2O75151 1096 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ZMYND10O75800 440 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 BEST1O76090 585 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 HEXIM1O94992 359 aaKnown RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 MYBL2P10244 700 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 GPD1P21695 349 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 CYP2C18P33260 490 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PCK1P35558 622 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 CCL23P55773 120 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 TAF5Q15542 800 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PKN2Q16513 984 aaKnown RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ATP13A4Q4VNC1 1196 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 BEND6Q5SZJ8 279 aaPredicted RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 TMCO3Q6UWJ1 677 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ANKS1BQ7Z6G8 1248 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 MTERF4Q7Z6M4 381 aaKnown RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ADAT2Q7Z6V5 191 aaKnown RBP9.92□□□□□ -0.82
SF3B1-211ENST00000487698 METTL23Q86XA0 190 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 CLEC4CQ8WTT0 213 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 RXFP2Q8WXD0 754 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 VWCEQ96DN2 955 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 TMEM30AQ9NV96 361 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 PCDHB7Q9Y5E2 793 aa9.92□□□□□ -0.82
SF3B1-211ENST00000487698 ERLIN1O75477 346 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SEC31AO94979 1220 aaKnown RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 FAM200BP0CF97 657 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 RARAP10276 462 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 PDGFRAP16234 1089 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 IL1R2P27930 398 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 PTPN7P35236 360 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 GJC1P36383 396 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 RNASELQ05823 741 aaKnown RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 OVOS1Q6IE37 1185 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 CCNI2Q6ZMN8 369 aaPredicted RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 CYP4V2Q6ZWL3 525 aaPredicted RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 RCOR2Q8IZ40 523 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ZMIZ2Q8NF64 920 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 OR10T2Q8NGX3 314 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 RBM41Q96IZ5 413 aaKnown RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SMOQ99835 787 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 C11orf84Q9BUA3 381 aaPredicted RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ARFGAP3Q9NP61 516 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ASNSD1Q9NWL6 643 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 AMACRQ9UHK6 382 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 C3orf70A6NLC5 250 aaPredicted RBP9.91□□□□□ -0.82
SF3B1-211ENST00000487698 HOXA2O43364 376 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 GRAP2O75791 330 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 KRT1P04264 644 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms