RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ASAH2Q9NR71 780 aa7.65□□□□□ -1.18
UBE4B-209ENST00000487244 IGSF9Q9P2J2 1179 aa7.65□□□□□ -1.18
UBE4B-209ENST00000487244 HOOK1Q9UJC3 728 aaKnown RBP7.65□□□□□ -1.18
UBE4B-209ENST00000487244 DUSP12Q9UNI6 340 aa7.65□□□□□ -1.18
UBE4B-209ENST00000487244 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
UBE4B-209ENST00000487244 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
UBE4B-209ENST00000487244 PCDHB5Q9Y5E4 795 aa7.65□□□□□ -1.18
UBE4B-209ENST00000487244 MIA3Q5JRA6 1907 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CLDN5O00501 218 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 PSMA7O14818 248 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 IKBKBO14920 756 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CETN3O15182 167 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CAPN5O15484 640 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 TACC1O75410 805 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ASS1P00966 412 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 EPB41P11171 864 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 KRT13P13646 458 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 HMGA1P17096 107 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CCNE1P24864 410 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 GABRR2P28476 465 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ATICP31939 592 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 GNL1P36915 607 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 VIPR2P41587 438 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 AP3M2P53677 418 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 VCPP55072 806 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 STX17P56962 302 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 MCCD1P59942 119 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 NOP14P78316 857 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CYP4F8P98187 520 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CYP27A1Q02318 531 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 GRM2Q14416 872 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 NFE2Q16621 373 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CFAP221Q4G0U5 840 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CBWD6Q4V339 395 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 DCAF17Q5H9S7 520 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ZNF667Q5HYK9 610 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CBWD3Q5JTY5 395 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CBWD5Q5RIA9 395 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CYP4A22Q5TCH4 519 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 TANGO2Q6ICL3 276 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CLEC17AQ6ZS10 378 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 DPH6Q7L8W6 267 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 TMEM150AQ86TG1 271 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 UBALD2Q8IYN6 164 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 SPATA18Q8TC71 538 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 C2orf15Q8WU43 125 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 NELFBQ8WX92 580 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 PBXIP1Q96AQ6 731 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 RSPRY1Q96DX4 576 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 PCED1BQ96HM7 432 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ASB16Q96NS5 453 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 IPO9Q96P70 1041 aaKnown RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 TSG101Q99816 390 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ARID3AQ99856 593 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 MKNK1Q9BUB5 465 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ZNF518BQ9C0D4 1074 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 SNX25Q9H3E2 840 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 SLITRK6Q9H5Y7 841 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 TMEM8AQ9HCN3 771 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ABCB6Q9NP58 842 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 LMBRD1Q9NUN5 540 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 GDE1Q9NZC3 331 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 HSFX1Q9UBD0 423 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 DACH1Q9UI36 760 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 CDH9Q9ULB4 789 aa7.64□□□□□ -1.19
UBE4B-209ENST00000487244 ZFP37Q9Y6Q3 630 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-209ENST00000487244 KRBA1A5PL33 1030 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SLC38A8A6NNN8 435 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 A8MXQ7 604 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 ZNF197O14709 1029 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SLC16A3O15427 465 aaKnown RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 TADA3O75528 432 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 PRAMEF12O95522 483 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SRFP11831 508 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 PTPN1P18031 435 aaKnown RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 BDNFP23560 247 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 TUFMP49411 452 aaKnown RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 MXI1P50539 228 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 NDST1P52848 882 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 GPC5P78333 572 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 FKBP3Q00688 224 aaKnown RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 LRRC63Q05C16 580 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SMARCB1Q12824 385 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 STIM1Q13586 685 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 VEPH1Q14D04 833 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SGSM1Q2NKQ1 1148 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 TCERG1LQ5VWI1 586 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 CWF19L1Q69YN2 538 aaKnown RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 MTSS1LQ765P7 747 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 ACOT1Q86TX2 421 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SPATA2LQ8IUW3 424 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SCN4BQ8IWT1 228 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SIX5Q8N196 739 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 LEMD2Q8NC56 503 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 B3GALNT2Q8NCR0 500 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 ZSCAN18Q8TBC5 510 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-209ENST00000487244 MYCBPAPQ8TBZ2 947 aa7.63□□□□□ -1.19
UBE4B-209ENST00000487244 SLC35C1Q96A29 364 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms