RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 DPEP3Q9H4B8 488 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 SLITRK6Q9H5Y7 841 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 METTL5Q9NRN9 209 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 DDX43Q9NXZ2 648 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 DDX56Q9NY93 547 aaKnown RBP7.42□□□□□ -1.22
SF3A3-206ENST00000487062 SMARCAL1Q9NZC9 954 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 RAB21Q9UL25 225 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 NME7Q9Y5B8 376 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 PCDHGA4Q9Y5G9 962 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 MICAL3Q7RTP6 2002 aa7.42□□□□□ -1.22
SF3A3-206ENST00000487062 TMEM189-UBE2V1I3L0A0 370 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 M0QZQ0 153 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 XPO1O14980 1071 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RRP9O43818 475 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 GJB6O95452 261 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 KRT7P08729 469 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 FAM200BP0CF97 657 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PYGMP11217 842 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 TYMPP19971 482 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 GPD1P21695 349 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RFC2P35250 354 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RFC1P35251 1148 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 GJC1P36383 396 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 MARCKSL1P49006 195 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RGS7P49802 495 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PRSS12P56730 875 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 COPS2P61201 443 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RBM10P98175 930 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 TSPY1Q01534 308 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 SLC6A3Q01959 620 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 TLE2Q04725 743 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 MAPRE1Q15691 268 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 MDH1BQ5I0G3 518 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 CLLU1OSQ5K130 101 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PRPF38BQ5VTL8 546 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PMF1Q6P1K2 205 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 FBXO38Q6PIJ6 1188 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 FAM183BPQ6ZVS7 135 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 MAATS1Q7Z4T9 603 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 POLNQ7Z5Q5 900 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 TMEM110Q86TL2 294 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 SLC13A5Q86YT5 568 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 CCDC50Q8IVM0 306 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 KLHL7Q8IXQ5 586 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RCOR2Q8IZ40 523 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 C3orf58Q8NDZ4 430 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 EXD1Q8NHP7 514 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 JOSD2Q8TAC2 188 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 SLC2A14Q8TDB8 520 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 HNRNPLLQ8WVV9 542 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 ARMC5Q96C12 935 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 SUSD3Q96L08 255 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 ACBD6Q9BR61 282 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 CNPY3Q9BT09 278 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 LRRC1Q9BTT6 524 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 DUSP16Q9BY84 665 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 MRPL9Q9BYD2 267 aaKnown RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 EPC1Q9H2F5 836 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 ARFGAP3Q9NP61 516 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 STIM2Q9P246 746 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 RASAL2Q9UJF2 1139 aa7.41□□□□□ -1.22
SF3A3-206ENST00000487062 COLQQ9Y215 455 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 FNDC1Q4ZHG4 1894 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-206ENST00000487062 F8VP50 259 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 FSCN2O14926 492 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 SART1O43290 800 aaKnown RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 HCRTO43612 131 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 PHF2O75151 1096 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 CXCL10P02778 98 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 HSPA8P11142 646 aaKnown RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 LCP1P13796 627 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 PDGFRAP16234 1089 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 NPR3P17342 541 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 ACAT1P24752 427 aaKnown RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 SDC4P31431 198 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 CHRNA3P32297 505 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 BRCC3P46736 316 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 OR1G1P47890 313 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 GJA8P48165 433 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 RPL34P49207 117 aaKnown RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 ZNF143P52747 638 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 CCL23P55773 120 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TAS2R40P59535 323 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 DSC1Q08554 894 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 DHX34Q14147 1143 aaKnown RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 IKBKEQ14164 716 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TRIM60Q495X7 471 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 PAN2Q504Q3 1202 aaKnown RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 EFHC1Q5JVL4 640 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 SND1Q7KZF4 910 aaKnown RBP eCLIP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms