RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 TARS2Q9BW92 718 aaKnown RBP12.77□□□□□ -0.37
COL3A1-206ENST00000487010 IMPG2Q9BZV3 1241 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
COL3A1-206ENST00000487010 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.77□□□□□ -0.37
COL3A1-206ENST00000487010 ZNF212Q9UDV6 495 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 CHMP2BQ9UQN3 213 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 SIP14410 1827 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 PSME4Q14997 1843 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 ADGRA2Q96PE1 1338 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 A8MXQ7 604 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 K7ERI5 159 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 CST3P01034 146 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 KRT7P08729 469 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PYGBP11216 843 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 GNAT1P11488 350 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 EIF4BP23588 611 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PSMA2P25787 234 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 IL1R2P27930 398 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 RFC1P35251 1148 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ELK3P41970 407 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PAPOLAP51003 745 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 SARNPP82979 210 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 SP4Q02446 784 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 MAP3K10Q02779 954 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 DGKZQ13574 1117 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 BAATQ14032 418 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 FKBP1CQ5VVH2 108 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PPFIBP2Q8ND30 876 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 DTX3LQ8TDB6 740 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 TMEM143Q96AN5 459 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ARHGEF4Q9NR80 690 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PAPOLBQ9NRJ5 636 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 SCOCQ9UIL1 159 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PCDHGC3Q9UN70 934 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 IKBKGQ9Y6K9 419 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 TCRBV9S1A1TA0A576 114 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 KLF11O14901 512 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 LRCH4O75427 683 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 STAM2O75886 525 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 INHBAP08476 426 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PGM1P36871 562 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 SERPINB4P48594 390 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 RAP1GDS1P52306 607 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 HADHQ16836 314 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 KBTBD12Q3ZCT8 623 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 XKR3Q5GH77 459 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ABHD15Q6UXT9 468 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 ARHGAP24Q8N264 748 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PDCD7Q8N8D1 485 aaKnown RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 FAM71DQ8N9W8 422 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 DEPTORQ8TB45 409 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 IFT43Q96FT9 208 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 GMLQ99445 158 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 LBHD1Q9BQE6 289 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
COL3A1-206ENST00000487010 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
COL3A1-206ENST00000487010 FAM237BA0A1B0GVD1 139 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 LRRIQ4A6NIV6 560 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 MAP3K7O43318 606 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 MAGEC1O60732 1142 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 RAD17O75943 681 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 RGS20O76081 388 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 NAMPTP43490 491 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 EIF3EP60228 445 aaKnown RBP12.75□□□□□ -0.37
COL3A1-206ENST00000487010 ACTR2P61160 394 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 TGFB2P61812 414 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 THOC5Q13769 683 aaKnown RBP12.75□□□□□ -0.37
COL3A1-206ENST00000487010 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 CWF19L1Q69YN2 538 aaKnown RBP12.75□□□□□ -0.37
COL3A1-206ENST00000487010 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 FAM83AQ86UY5 434 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 TFAP2BQ92481 460 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 NMUR2Q9GZQ4 415 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 PORCNQ9H237 461 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 PIDD1Q9HB75 910 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 ARMCX1Q9P291 453 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 C2CD2Q9Y426 696 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 TEX264Q9Y6I9 313 aa12.75□□□□□ -0.37
COL3A1-206ENST00000487010 CAPN14A8MX76 684 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 E5RJQ4 531 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 EDN1P05305 212 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 GSTA2P09210 222 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 CD48P09326 243 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 KRT3P12035 628 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 AMPD1P23109 780 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 AP3M2P53677 418 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 RNF220Q5VTB9 566 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 ALYREFQ86V81 257 aaKnown RBP12.74□□□□□ -0.37
COL3A1-206ENST00000487010 ZC3H18Q86VM9 953 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms