RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 GIPC1O14908 333 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 ATP2C2O75185 946 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 IDEP14735 1019 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 ANXA13P27216 316 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 GRIK1P39086 918 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 SH3PXD2AQ5TCZ1 1133 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 LIMS2Q7Z4I7 341 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 KBTBD7Q8WVZ9 684 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 HPDLQ96IR7 371 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 PCIF1Q9H4Z3 704 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 FAM208BQ5VWN6 2430 aa21.43■■□□□ 1.02
PHF1-208ENST00000486845 KIAA0391O15091 583 aaKnown RBP21.42■■□□□ 1.02
PHF1-208ENST00000486845 ALDH1A2O94788 518 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 TNNC2P02585 160 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 BCKDHBP21953 392 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 BDNFP23560 247 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 PPP3CCP48454 512 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 PSMC1P62191 440 aaKnown RBP21.42■■□□□ 1.02
PHF1-208ENST00000486845 MRPS21P82921 87 aaKnown RBP21.42■■□□□ 1.02
PHF1-208ENST00000486845 CRY1Q16526 586 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 UNQ6494/PRO21346Q6UXR6 183 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 DENND5BQ6ZUT9 1274 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 GPD1LQ8N335 351 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 CCDC33Q8N5R6 958 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 CRTAC1Q9NQ79 661 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 INTS13Q9NVM9 706 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 FBXO2Q9UK22 296 aaPredicted RBP21.42■■□□□ 1.02
PHF1-208ENST00000486845 SRPRBQ9Y5M8 271 aaKnown RBP21.42■■□□□ 1.02
PHF1-208ENST00000486845 CLIC4Q9Y696 253 aa21.42■■□□□ 1.02
PHF1-208ENST00000486845 FRMD3A2A2Y4 597 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 SLC9A3R1O14745 358 aaPredicted RBP21.41■■□□□ 1.02
PHF1-208ENST00000486845 TRIM66O15016 1216 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 CYP17A1P05093 508 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 CEACAM1P13688 526 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 CSRP1P21291 193 aaKnown RBP21.41■■□□□ 1.02
PHF1-208ENST00000486845 DHPSP49366 369 aaPredicted RBP21.41■■□□□ 1.02
PHF1-208ENST00000486845 SLC7A9P82251 487 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 CYP27A1Q02318 531 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 FOXC1Q12948 553 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 SURF1Q15526 300 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 GAB4Q2WGN9 574 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 LMBRD2Q68DH5 695 aaPredicted RBP21.41■■□□□ 1.02
PHF1-208ENST00000486845 CCDC73Q6ZRK6 1079 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 MDGA1Q8NFP4 955 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 TTLL2Q9BWV7 592 aa21.41■■□□□ 1.02
PHF1-208ENST00000486845 PTPRDP23468 1912 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 C1QTNF9BB2RNN3 333 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 C1QTNF9P0C862 333 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 WARSP23381 471 aaKnown RBP21.4■■□□□ 1.02
PHF1-208ENST00000486845 LMO2P25791 158 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 USP46P62068 366 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 ZXDBP98169 803 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 DUOXA2Q1HG44 320 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 FILIP1Q7Z7B0 1213 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 TTC30AQ86WT1 665 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 OR5B17Q8NGF7 314 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 OLIG1Q8TAK6 271 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 SPACA7Q96KW9 195 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 FGFBP2Q9BYJ0 223 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 PANK4Q9NVE7 773 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 EVLQ9UI08 416 aaPredicted RBP21.4■■□□□ 1.02
PHF1-208ENST00000486845 CACNA1GO43497 2377 aa21.4■■□□□ 1.02
PHF1-208ENST00000486845 PTPRJQ12913 1337 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 VPS37CA5D8V6 355 aaPredicted RBP21.39■■□□□ 1.01
PHF1-208ENST00000486845 ZNF840PA6NDX5 716 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 ZNF233A6NK53 670 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 PATE3B3GLJ2 98 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 CDX4O14627 284 aaPredicted RBP21.39■■□□□ 1.01
PHF1-208ENST00000486845 PDGFRBP09619 1106 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 EIF2DP41214 584 aaKnown RBP21.39■■□□□ 1.01
PHF1-208ENST00000486845 STAT6P42226 847 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 NOP14P78316 857 aaKnown RBP21.39■■□□□ 1.01
PHF1-208ENST00000486845 DHCR24Q15392 516 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 HSF5Q4G112 596 aaPredicted RBP21.39■■□□□ 1.01
PHF1-208ENST00000486845 STXBP4Q6ZWJ1 553 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 LPCAT2Q7L5N7 544 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 ADGRG2Q8IZP9 1017 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 MYCBPAPQ8TBZ2 947 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 WHAMMQ8TF30 809 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 PIGKQ92643 395 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 PCED1BQ96HM7 432 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 CLIC6Q96NY7 704 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 PNKPQ96T60 521 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 CPQQ9Y646 472 aa21.39■■□□□ 1.01
PHF1-208ENST00000486845 PRPF6O94906 941 aaKnown RBP21.38■■□□□ 1.01
PHF1-208ENST00000486845 OLFM2O95897 454 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 APODP05090 189 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 P2RY2P41231 377 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 IRX4P78413 519 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 LMAN2Q12907 356 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 TMEM92Q6UXU6 159 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 DDX42Q86XP3 938 aaKnown RBP eCLIP21.38■■□□□ 1.01
PHF1-208ENST00000486845 ALLCQ8N6M5 410 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 C8orf48Q96LL4 319 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 MMS19Q96T76 1030 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 RNF38Q9H0F5 515 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 POLMQ9NP87 494 aaPredicted RBP21.38■■□□□ 1.01
PHF1-208ENST00000486845 SMPD4Q9NXE4 827 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 WASF3Q9UPY6 502 aa21.38■■□□□ 1.01
PHF1-208ENST00000486845 IGF2RP11717 2491 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms