RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CASP5P51878 434 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CRY1Q16526 586 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 DUOXA2Q1HG44 320 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 TCEAL6Q6IPX3 200 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CCDC73Q6ZRK6 1079 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 SCN4BQ8IWT1 228 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 SYCP3Q8IZU3 236 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 GPD1LQ8N335 351 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 OLIG1Q8TAK6 271 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 TCEAL3Q969E4 200 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 ANKRD36BP1Q96IX9 119 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 SYT15Q9BQS2 421 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 MTMR12Q9C0I1 747 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CRTAC1Q9NQ79 661 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 TRPM5Q9NZQ8 1165 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CLIC4Q9Y696 253 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 FRYQ5TBA9 3013 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 MYOFQ9NZM1 2061 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 ZNF840PA6NDX5 716 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 C4orf47A7E2U8 309 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 LEFTY2O00292 366 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-227ENST00000485102 KHNYNO15037 678 aaKnown RBP13.91□□□□□ -0.18
HDAC6-227ENST00000485102 ATP2C2O75185 946 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 KRT19P08727 400 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 CHRM1P11229 460 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-227ENST00000485102 KCNA4P22459 653 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 LMO2P25791 158 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 TXLNAP40222 546 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 PSMD2Q13200 908 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 BECN1Q14457 450 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 CCDC142Q17RM4 750 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 SPDYCQ5MJ68 293 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 PSAPL1Q6NUJ1 521 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 HSCBQ8IWL3 235 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 MYCBPAPQ8TBZ2 947 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 SNX21Q969T3 373 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 C8orf48Q96LL4 319 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 TBC1D7Q9P0N9 293 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 EVLQ9UI08 416 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-227ENST00000485102 IGF2RP11717 2491 aa13.91□□□□□ -0.18
HDAC6-227ENST00000485102 GOLGA8IPA6NC78 632 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 GOLGA8JA6NMD2 632 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 CDX4O14627 284 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-227ENST00000485102 TRIM66O15016 1216 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 HCRTO43612 131 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 TACC1O75410 805 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 OAS1P00973 400 aaKnown RBP13.9□□□□□ -0.18
HDAC6-227ENST00000485102 PDCP20941 246 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 BDNFP23560 247 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 GBP1P32455 592 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 GRIK1P39086 918 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 NOVA1P51513 510 aaKnown RBP13.9□□□□□ -0.18
HDAC6-227ENST00000485102 USP46P62068 366 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 CUL4AQ13619 759 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 KDF1Q8NAX2 398 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-227ENST00000485102 OR5B17Q8NGF7 314 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 MYLPFQ96A32 169 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 PCED1BQ96HM7 432 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
HDAC6-227ENST00000485102 RNF38Q9H0F5 515 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 TMEM9BQ9NQ34 198 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 PANK4Q9NVE7 773 aa13.9□□□□□ -0.18
HDAC6-227ENST00000485102 R3HCC1Q9Y3T6 440 aaKnown RBP13.9□□□□□ -0.18
HDAC6-227ENST00000485102 ASPMQ8IZT6 3477 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 ATRXP46100 2492 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
HDAC6-227ENST00000485102 TNNC2P02585 160 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 CYP17A1P05093 508 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 IDEP14735 1019 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 ANXA13P27216 316 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 P2RY2P41231 377 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 DPP6P42658 865 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 DHCR24Q15392 516 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 C2orf27AQ580R0 203 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 DDX42Q86XP3 938 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDAC6-227ENST00000485102 WDR49Q8IV35 697 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 MDGA1Q8NFP4 955 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 CLIC6Q96NY7 704 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 PNKPQ96T60 521 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 FGFBP2Q9BYJ0 223 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 PCIF1Q9H4Z3 704 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 PLXND1Q9Y4D7 1925 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
HDAC6-227ENST00000485102 TNFRSF10BO14763 440 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 GIPC1O14908 333 aa13.88□□□□□ -0.19
HDAC6-227ENST00000485102 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
HDAC6-227ENST00000485102 GNL1P36915 607 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-227ENST00000485102 STAT6P42226 847 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms