RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 DDX6P26196 483 aaKnown RBP eCLIP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 LRPAP1P30533 357 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 MAPK8P45983 427 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 ATP1A2P50993 1020 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 ATXN3P54252 364 aaPredicted RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 PEX3P56589 373 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 TRIM61Q5EBN2 209 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 LMBRD2Q68DH5 695 aaPredicted RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 TREML4Q6UXN2 200 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 TTC9BQ8N6N2 239 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 HNRNPLLQ8WVV9 542 aaKnown RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 PIGKQ92643 395 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 CD101Q93033 1021 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 SPACA7Q96KW9 195 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 TPSD1Q9BZJ3 242 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 KMT5AQ9NQR1 393 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 RAB6BQ9NRW1 208 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 PDRG1Q9NUG6 133 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 EVLQ9UI08 416 aaPredicted RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 UBQLN1Q9UMX0 589 aaKnown RBP9.22□□□□□ -0.93
DDX39B-221ENST00000484566 INVSQ9Y283 1065 aa9.22□□□□□ -0.93
DDX39B-221ENST00000484566 TSC2P49815 1807 aa9.21□□□□□ -0.93
DDX39B-221ENST00000484566 APC2O95996 2303 aa9.21□□□□□ -0.93
DDX39B-221ENST00000484566 MYH11P35749 1972 aa9.21□□□□□ -0.93
DDX39B-221ENST00000484566 SPAARA0A1B0GVQ0 90 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 OTOL1A6NHN0 477 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 OR52Z1P0C646 297 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CXCL8P10145 99 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 ARSAP15289 507 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CYP3A5P20815 502 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 U2AF2P26368 475 aaKnown RBP eCLIP9.21□□□□□ -0.941e-25■■■■■ 26.8
DDX39B-221ENST00000484566 MCM7P33993 719 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 GJA4P35212 333 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CCT6AP40227 531 aaKnown RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 DPP6P42658 865 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 MATR3P43243 847 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 NPTX2P47972 431 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 AARSP49588 968 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 GALK1P51570 392 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 IRX4P78413 519 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CENPCQ03188 943 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 PTSQ03393 145 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 PPP2R3AQ06190 1150 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 STRN3Q13033 797 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 TRIM29Q14134 588 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 FOXD4L5Q5VV16 416 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 ANO7Q6IWH7 933 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 DIS3L2Q8IYB7 885 aaKnown RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 HDDC3Q8N4P3 179 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 MRPS31Q92665 395 aaKnown RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 USP13Q92995 863 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CHFRQ96EP1 664 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CNOT6LQ96LI5 555 aaKnown RBP9.21□□□□□ -0.94
DDX39B-221ENST00000484566 DRC1Q96MC2 740 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 SLC46A2Q9BY10 475 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 PLEKHA5Q9HAU0 1116 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 POLD4Q9HCU8 107 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 TDP1Q9NUW8 608 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 ARHGAP28Q9P2N2 729 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 CCL26Q9Y258 94 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 OBSL1O75147 1896 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 RELNP78509 3460 aa9.21□□□□□ -0.94
DDX39B-221ENST00000484566 ANK1P16157 1881 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 BTBD18B2RXH4 712 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ABLIM1O14639 778 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 MEFVO15553 781 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-221ENST00000484566 HIP1RO75146 1068 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 TOM1L1O75674 476 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ALDH1A2O94788 518 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ATF6P18850 670 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 BCKDHBP21953 392 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 IFNAR2P48551 515 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 GDF10P55107 478 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SPAG1Q07617 926 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SMARCB1Q12824 385 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 MTF1Q14872 753 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ZNF423Q2M1K9 1284 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SLC10A6Q3KNW5 377 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SLC39A12Q504Y0 691 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SEZ6Q53EL9 994 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 LPCAT2Q7L5N7 544 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 RASSF3Q86WH2 238 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 TTC30AQ86WT1 665 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SKAP1Q86WV1 359 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ZNF843Q8N446 348 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 MAB21L3Q8N8X9 362 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 TTC16Q8NEE8 873 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 SPPL2BQ8TCT7 592 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 C2orf15Q8WU43 125 aaKnown RBP9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ATP2A3Q93084 1043 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 UBL7Q96S82 380 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-221ENST00000484566 TM6SF1Q9BZW5 370 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
DDX39B-221ENST00000484566 ECT2Q9H8V3 914 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms