RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CYP46A1Q9Y6A2 500 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 MYBBP1AQ9BQG0 1328 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 TRIM64A6NGJ6 449 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TRIM64BA6NI03 449 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 NT5C1B-RDH14C9J2C7 533 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 AP3D1O14617 1153 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 KCNQ3O43525 872 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TSPAN3O60637 253 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TBCAO75347 108 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 PTP4A3O75365 173 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 ABHD16AO95870 558 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 ANXA1P04083 346 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 HNRNPA1P09651 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 HSPA1AP0DMV8 641 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 HSPA1BP0DMV9 641 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TXNP10599 105 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 EGR1P18146 543 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 HDCP19113 662 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 PSMA3P25788 255 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 ADSLP30566 484 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 ARL3P36405 182 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 PIK3CGP48736 1102 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 SEC24CP53992 1094 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 MAP3K12Q12852 859 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 MAMLD1Q13495 774 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 BECN1Q14457 450 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 SMC1AQ14683 1233 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 BAK1Q16611 211 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 SKIDA1Q1XH10 827 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 SLC9C2Q5TAH2 1124 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 Q6ZUG5 572 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 R3HCC1LQ7Z5L2 792 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 PROSER1Q86XN7 944 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TRMT2AQ8IZ69 625 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 DTX3Q8N9I9 347 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 USP38Q8NB14 1042 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 MSANTD4Q8NCY6 345 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 CCHCR1Q8TD31 782 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TNPO1Q92973 898 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 RAB24Q969Q5 203 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 PKNOX2Q96KN3 472 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 CNDP2Q96KP4 475 aaKnown RBP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TRAPPC9Q96Q05 1148 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 YME1L1Q96TA2 773 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TWSG1Q9GZX9 223 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 DBNDD1Q9H9R9 158 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTCD3-214ENST00000483925 GALNT8Q9NY28 637 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 TMEM5Q9Y2B1 443 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 HS3ST4Q9Y661 456 aa4.95□□□□□ -1.62
PTCD3-214ENST00000483925 LMTK3Q96Q04 1460 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CCDC78A2IDD5 438 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 H0Y3Z8 333 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 F2RL2O00254 374 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 SPTLC2O15270 562 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 HSPA4LO95757 839 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 MPIG6BO95866 241 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 KNG1P01042 644 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 AHSGP02765 367 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CSF1P09603 554 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 LTA4HP09960 611 aaKnown RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 FAM200BP0CF97 657 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 JUPP14923 745 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PORP16435 677 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 MUTP22033 750 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PSMA4P25789 261 aaKnown RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PIK3CAP42336 1068 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 SLC6A9P48067 706 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 MCM2P49736 904 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PRKAA2P54646 552 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 SNX16P57768 344 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 SCAPQ12770 1279 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CHAF1BQ13112 559 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CTBP1Q13363 440 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ACVR2BQ13705 512 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 RASA2Q15283 850 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ATP2B3Q16720 1220 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 DGKDQ16760 1214 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 TTC31Q49AM3 519 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 C19orf54Q5BKX5 351 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PHF19Q5T6S3 580 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ATG16L1Q676U5 607 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 RAB11FIP2Q7L804 512 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ANKS1BQ7Z6G8 1248 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PRPF39Q86UA1 669 aaKnown RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 IQCA1Q86XH1 822 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 TOR1AIP2Q8NFQ8 470 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CREB3L4Q8TEY5 395 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 SNX33Q8WV41 574 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CUL5Q93034 780 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 RNF125Q96EQ8 232 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 AJUBAQ96IF1 538 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 FEM1CQ96JP0 617 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 UHRF1Q96T88 793 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 FDXACB1Q9BRP7 624 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 AMNQ9BXJ7 453 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 TP63Q9H3D4 680 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 RNPEPQ9H4A4 650 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 PRDM13Q9H4Q3 707 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms