RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 PDE8BO95263 885 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 MT-CO1P00395 513 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 KRT76Q01546 638 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 COG2Q14746 738 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 RADILQ96JH8 1075 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 MANSC1Q9H8J5 431 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 SIRPGQ9P1W8 387 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 BTBD3Q9Y2F9 522 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 CTIFO43310 598 aaKnown RBP11.99□□□□□ -0.49
TRIM27-205ENST00000481474 MTA2O94776 668 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 ALDH2P05091 517 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 CALB1P05937 261 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 FAXCQ5TGI0 409 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 XPO6Q96QU8 1125 aaKnown RBP11.99□□□□□ -0.49
TRIM27-205ENST00000481474 APOL2Q9BQE5 337 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 ATG10Q9H0Y0 220 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 CATSPERBQ9H7T0 1116 aa11.99□□□□□ -0.49
TRIM27-205ENST00000481474 A0A1B0GW55 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 HYKKA2RU49 373 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 AP3B1O00203 1094 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4L2P0CJ85 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4L3P0CJ86 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4L4P0CJ87 422 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4L5P0CJ88 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4L6P0CJ89 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CETPP11597 493 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 ACO1P21399 889 aaKnown RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 GMPSP49915 693 aaPredicted RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 FKBP3Q00688 224 aaKnown RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 MC1RQ01726 317 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 TMPRSS9Q7Z410 1059 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CEP95Q96GE4 821 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 AIFM3Q96NN9 605 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CORO1BQ9BR76 489 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DUX4Q9UBX2 424 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 A0A096LPK6 155 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 SGSM2O43147 1006 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 QARSP47897 775 aaKnown RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 GLRBP48167 497 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 MAN2A1Q16706 1144 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DAW1Q8N136 415 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 LRRC39Q96DD0 335 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DNMT3LQ9UJW3 386 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 NESP48681 1621 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 DAPK1P53355 1430 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 BHMG1C9JSJ3 638 aaPredicted RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 TLL1O43897 1013 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 SERPING1P05155 500 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 SOX6P35712 828 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 PLA2G4AP47712 749 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 RHOAP61586 193 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 FGD3Q5JSP0 725 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 C18orf25Q96B23 403 aaPredicted RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CHORDC1Q9UHD1 332 aaPredicted RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 TRDMT1O14717 391 aaKnown RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 TP73O15350 636 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 VAMP4O75379 141 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 PDGFRAP16234 1089 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 GRB14Q14449 540 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CNGA3Q16281 694 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 SAPCD2Q86UD0 394 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 C7orf61Q8IZ16 206 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 SEMA4DQ92854 862 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CDADC1Q9BWV3 514 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 TLR7Q9NYK1 1049 aaKnown RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 C2orf81A6NN90 581 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CYP26A1O43174 497 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 LTFP02788 710 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 GJA1P17302 382 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 FGFR4P22455 802 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CAPZA1P52907 286 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 EIF3BP55884 814 aaKnown RBP11.98□□□□□ -0.49
TRIM27-205ENST00000481474 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 ELMO1Q92556 727 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CYFIP2Q96F07 1278 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 PI4K2AQ9BTU6 479 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 NUP50Q9UKX7 468 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 VAV1P15498 845 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 C6orf118Q5T5N4 469 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 CAMKK2Q96RR4 588 aa11.98□□□□□ -0.49
TRIM27-205ENST00000481474 TRPM2O94759 1503 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 MCIDASD6RGH6 385 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 IL1BP01584 269 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 TMED10P49755 219 aaKnown RBP11.97□□□□□ -0.49
TRIM27-205ENST00000481474 ABCE1P61221 599 aaKnown RBP11.97□□□□□ -0.49
TRIM27-205ENST00000481474 SUSD4Q5VX71 490 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 C11orf57Q6ZUT1 292 aaPredicted RBP11.97□□□□□ -0.49
TRIM27-205ENST00000481474 SERHL2Q9H4I8 314 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 SERHLQ9NQF3 203 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 NRBP1Q9UHY1 535 aa11.97□□□□□ -0.49
TRIM27-205ENST00000481474 MYL2P10916 166 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms