RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LRG1P02750 347 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 UCHL3P15374 230 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 PRKCEQ02156 737 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 SGO1Q5FBB7 561 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 C10orf120Q5SQS8 335 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 GJC2Q5T442 439 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF669Q96BR6 464 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-212ENST00000480614 CACNA2D2Q9NY47 1150 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 RNF112Q9ULX5 631 aa9.89□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM120BA0PK00 339 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 SLC22A9Q8IVM8 553 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 GPRC5AQ8NFJ5 357 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 SEC16BQ96JE7 1060 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 DPP7Q9UHL4 492 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 TDP2O95551 362 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 CHI3L2Q15782 390 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 WDR24Q96S15 920 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 VPS51Q9UID3 782 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 LARGE1O95461 756 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 PLA2G4FQ68DD2 849 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM154Q6P9G4 183 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 COL23A1Q86Y22 540 aaPredicted RBP9.88□□□□□ -0.83
VEGFA-212ENST00000480614 NLNQ9BYT8 704 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
VEGFA-212ENST00000480614 NCAM2O15394 837 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 RBP1P09455 135 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 DDHD1Q8NEL9 900 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 VPS33AQ96AX1 596 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 SMIM31A0A1B0GVY4 71 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ADGRB3O60242 1522 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 HPGDP15428 266 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 CYP4A22Q5TCH4 519 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 LRRC6Q86X45 466 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 WDR48Q8TAF3 677 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 FEZF2Q8TBJ5 459 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 FAM45AQ8TCE6 357 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 B2RBV5 119 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 THRAP10827 490 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 TAB1Q15750 504 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ZCCHC8Q6NZY4 707 aaKnown RBP9.88□□□□□ -0.83
VEGFA-212ENST00000480614 RIT2Q99578 217 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 TRPM5Q9NZQ8 1165 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 F5H5T6 163 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 F9P00740 461 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 HMGCS2P54868 508 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 IRAK1BP1Q5VVH5 260 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 EXD1Q8NHP7 514 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF521Q96K83 1311 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 SNX30Q5VWJ9 437 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 C19orf18Q8NEA5 215 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ERP44Q9BS26 406 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.88□□□□□ -0.834e-6■□□□□ 10.5
VEGFA-212ENST00000480614 E9PCH4 1651 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 STX7O15400 261 aaKnown RBP9.88□□□□□ -0.83
VEGFA-212ENST00000480614 RHOBTB3O94955 611 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 HOXC6P09630 235 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 AKR1B1P15121 316 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ITGA1P56199 1179 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 HERC6Q8IVU3 1022 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 JADE3Q92613 823 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 MTERF3Q96E29 417 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ZC3H11AO75152 810 aaKnown RBP eCLIP9.88□□□□□ -0.834e-14■■■■■ 46.5
VEGFA-212ENST00000480614 VPS4BO75351 444 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 SLC44A4Q53GD3 710 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 GPAT2Q6NUI2 795 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 NEK10Q6ZWH5 1172 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 CPA5Q8WXQ8 436 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 ZFYVE28Q9HCC9 887 aa9.88□□□□□ -0.83
VEGFA-212ENST00000480614 MADDQ8WXG6 1647 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 NUP214P35658 2090 aaPredicted RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 GALCP54803 685 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 LRRC1Q9BTT6 524 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 AFF2P51816 1311 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CRTAMO95727 393 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 HLA-DRAP01903 254 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 RGS7P49802 495 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 MTMR4Q9NYA4 1195 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 STARD13Q9Y3M8 1113 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 MED14O60244 1454 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CENPXA8MT69 81 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ALDH6A1Q02252 535 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 TSNQ15631 228 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 FAM180AQ6UWF9 173 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 MOSPD2Q8NHP6 518 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CASP10Q92851 521 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 SERHL2Q9H4I8 314 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 SERHLQ9NQF3 203 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 PDGFCQ9NRA1 345 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 GSG1L2A8MUP6 293 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ENTPD3O75355 529 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ITGALP20701 1170 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 COLEC11Q9BWP8 271 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 AP3M1Q9Y2T2 418 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms