RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 YIPF1Q9Y548 306 aa13.26□□□□□ -0.29
TRAPPC12-218ENST00000479897 PRRC2BQ5JSZ5 2229 aaKnown RBP13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 SOWAHDA6NJG2 315 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 EIF3CLB5ME19 914 aaKnown RBP13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 HHLA1C9JL84 531 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 F8VP50 259 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 RFXAPO00287 272 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 AKR1B10O60218 316 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 BEST1O76090 585 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 SEC24AO95486 1093 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 HOXA9P31269 272 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 DUSP4Q13115 394 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 PLD1Q13393 1074 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 KCNC3Q14003 757 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 RAB41Q5JT25 222 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 RAD9BQ6WBX8 426 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 PHF13Q86YI8 300 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 PASD1Q8IV76 773 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 SCML4Q8N228 414 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 KREMEN2Q8NCW0 462 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 EIF3CQ99613 913 aaKnown RBP13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 PRDM12Q9H4Q4 367 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 CYTH4Q9UIA0 394 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 INSL5Q9Y5Q6 135 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 OBSL1O75147 1896 aa13.25□□□□□ -0.29
TRAPPC12-218ENST00000479897 TNFRSF10BO14763 440 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 RTN2O75298 545 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 CSPG5O95196 566 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 NDUFA10O95299 355 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 ATF6P18850 670 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 MMP8P22894 467 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 ELF1P32519 619 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 ACADSBP45954 432 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 GABRB2P47870 512 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 MAP3K7CLP57077 242 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 MGAT5BQ3V5L5 792 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 PTPN20Q4JDL3 420 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 C10orf76Q5T2E6 689 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 NAA35Q5VZE5 725 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 ACAD10Q6JQN1 1059 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 PMF1Q6P1K2 205 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 MON1BQ7L1V2 547 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 TMEM110Q86TL2 294 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 UBA3Q8TBC4 463 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 IPO4Q8TEX9 1081 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 VCPIP1Q96JH7 1222 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 SEPT5Q99719 369 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 MIS12Q9H081 205 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 TLE6Q9H808 572 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 CYP4F11Q9HBI6 524 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 SEPT11Q9NVA2 429 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 COMMD8Q9NX08 183 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 IL37Q9NZH6 218 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC12-218ENST00000479897 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 FAM92AA1XBS5 289 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 TULP2O00295 520 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 PRRG1O14668 218 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 ZNF263O14978 683 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 C8AP07357 584 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 SCNN1AP37088 669 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 GRIK1P39086 918 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 NRIP1P48552 1158 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 SNX16P57768 344 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 PTP4A2Q12974 167 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 TMEM184AQ6ZMB5 413 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 TRIM11Q96F44 468 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 PPP1R13BQ96KQ4 1090 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 CPXM1Q96SM3 734 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 KCNK16Q96T55 309 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 MAN1C1Q9NR34 630 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 DZANK1Q9NVP4 752 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
TRAPPC12-218ENST00000479897 ASB3Q9Y575 518 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms