RNA–Protein interactions for RNA: ENST00000478490.5

MITF-215, Transcript of melanogenesis associated transcription factor, human

TSL 5

Gene MITF, Length 1,642 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-215	ENST00000478490	GFPT2	O94808	682 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	GCNT3	O95395	438 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	SEC24A	O95486	1093 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	CCDC172	P0C7W6	258 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	KCNE1	P15382	129 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	TCP1	P17987	556 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	KLK7	P49862	253 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	CREM	Q03060	361 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	GABPB1	Q06547	395 aa	Predicted RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	MCL1	Q07820	350 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	KCNMA1	Q12791	1236 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	KCNH2	Q12809	1159 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	TCF15	Q12870	199 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	ELAVL2	Q12926	359 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	GPS2	Q13227	327 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	ENOX2	Q16206	610 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	IFI16	Q16666	785 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	QPCT	Q16769	361 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	PTPRN	Q16849	979 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	XKR4	Q5GH76	650 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	SLC39A4	Q6P5W5	647 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	VPS36	Q86VN1	386 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	SIX5	Q8N196	739 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	MSANTD4	Q8NCY6	345 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	ZSWIM2	Q8NEG5	633 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	HDAC7	Q8WUI4	952 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	TMEM174	Q8WUU8	243 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	CCDC97	Q96F63	343 aa	Predicted RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	FAM84A	Q96KN4	292 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	UROC1	Q96N76	676 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	NTPCR	Q9BSD7	190 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	MSTO1	Q9BUK6	570 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	LSM14B	Q9BX40	385 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	TMEM206	Q9H813	350 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	C17orf75	Q9HAS0	396 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	EVA1B	Q9NVM1	165 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	ZDHHC7	Q9NXF8	308 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	AIPL1	Q9NZN9	384 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	CNTN3	Q9P232	1028 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	ARHGAP20	Q9P2F6	1191 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	LARS	Q9P2J5	1176 aa	Known RBP	6.68	□□□□□ -1.34
MITF-215	ENST00000478490	MTRR	Q9UBK8	725 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	RNF14	Q9UBS8	474 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	DPP7	Q9UHL4	492 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	RAB21	Q9UL25	225 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	NUB1	Q9Y5A7	615 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	PCDHA13	Q9Y5I0	950 aa		6.68	□□□□□ -1.34
MITF-215	ENST00000478490	FANCM	Q8IYD8	2048 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	GREB1	Q4ZG55	1949 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ANAPC1	Q9H1A4	1944 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	SPTBN4	Q9H254	2564 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	WDR27	A2RRH5	827 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	TMEM189-UBE2V1	I3L0A0	370 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	PRRG1	O14668	218 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	TRAPPC3	O43617	180 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	NR3C1	P04150	777 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	OR4Q2	P0C623	313 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	LAMP2	P13473	410 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	NPR3	P17342	541 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	RFX1	P22670	979 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ABCD1	P33897	745 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	PSMC2	P35998	433 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	EIF4A3	P38919	411 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	MAGEA1	P43355	309 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ACOT2	P49753	483 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ROR1	Q01973	937 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	RAB33A	Q14088	237 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ASIC2	Q16515	512 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	EXOC3L4	Q17RC7	722 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ASTE1	Q2TB18	679 aa	Predicted RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	LINC01559	Q495D7	138 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	MAP9	Q49MG5	647 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	CTXN3	Q4LDR2	81 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	TDRD12	Q587J7	1177 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	CWF19L1	Q69YN2	538 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	JADE1	Q6IE81	842 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	PARM1	Q6UWI2	310 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	GBP6	Q6ZN66	633 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	SLC9A9	Q8IVB4	645 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	SLC44A3	Q8N4M1	653 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	SNIP1	Q8TAD8	396 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ATOH1	Q92858	354 aa	Predicted RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	FGF14	Q92915	247 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	EEF2KMT	Q96G04	330 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	NOX5	Q96PH1	765 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	SPAG5	Q96R06	1193 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	KXD1	Q9BQD3	176 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	ACBD3	Q9H3P7	528 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	RPF1	Q9H9Y2	349 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	CYP4F11	Q9HBI6	524 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	SLC38A7	Q9NVC3	462 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	FAM53C	Q9NYF3	392 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	DNMT3B	Q9UBC3	853 aa	Known RBP	6.67	□□□□□ -1.34
MITF-215	ENST00000478490	KCNG1	Q9UIX4	513 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	DUSP12	Q9UNI6	340 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	FRMD4B	Q9Y2L6	1034 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	NUMBL	Q9Y6R0	609 aa		6.67	□□□□□ -1.34
MITF-215	ENST00000478490	PTPRD	P23468	1912 aa		6.66	□□□□□ -1.34
MITF-215	ENST00000478490	TARSL2	A2RTX5	802 aa	Known RBP	6.66	□□□□□ -1.34
MITF-215	ENST00000478490	KRBA1	A5PL33	1030 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms