RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SYCP2LQ5T4T6 812 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 SH3RF2Q8TEC5 729 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 BAP1Q92560 729 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 PNKPQ96T60 521 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 TARS2Q9BW92 718 aaKnown RBP10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 MRPL4Q9BYD3 311 aaKnown RBP10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 SEMA4CQ9C0C4 833 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 ABI2Q9NYB9 513 aaPredicted RBP10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 CYP8B1Q9UNU6 501 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 PTPRQQ9UMZ3 2332 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 BOD1L1Q8NFC6 3051 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 TRAV19A0A0A6YYK7 116 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ARHGEF35A5YM69 484 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 FLRT2O43155 660 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC28A2O43868 658 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 NDUFS2O75306 463 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 CILPO75339 1184 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ZNF217O75362 1048 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 TADA3O75528 432 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 KAT7O95251 611 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 SPATA31C1P0DKV0 1188 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 GPR15P49685 360 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 CALCRLQ16602 461 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ZC2HC1CQ53FD0 456 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 WDR45BQ5MNZ6 344 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 MPZL3Q6UWV2 235 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 BRAPQ7Z569 592 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 FAM177A1Q8N128 213 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ARL14EPQ8N8R7 260 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 SPATA18Q8TC71 538 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 SPPL2BQ8TCT7 592 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 C2orf15Q8WU43 125 aaKnown RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ZNF419Q96HQ0 510 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 SENP8Q96LD8 212 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ZCWPW1Q9H0M4 648 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 ZSCAN16Q9H4T2 348 aaPredicted RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 TMEM206Q9H813 350 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 GJB4Q9NTQ9 266 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 AK5Q9Y6K8 562 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 PHLPP2Q6ZVD8 1323 aa10.46□□□□□ -0.73
SMARCB1-206ENST00000477836 COL5A1P20908 1838 aaPredicted RBP10.46□□□□□ -0.74
SMARCB1-206ENST00000477836 PTPN13Q12923 2485 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 TSC2P49815 1807 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 A0A1B0GTW7 788 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 CCDC169A6NNP5 214 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 ABLIM1O14639 778 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 PPEF2O14830 753 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 MED24O75448 989 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 CER1O95813 267 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 NTRK1P04629 796 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 ZNF883P0CG24 379 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 CSH1P0DML2 217 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 CSH2P0DML3 217 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 CXCL8P10145 99 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 PROZP22891 400 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 KRT2P35908 639 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 MATKP42679 507 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 GUCY2FP51841 1108 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 KDSRQ06136 332 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 MYO1EQ12965 1108 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 EARS2Q5JPH6 523 aaKnown RBP10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 SDHAF4Q5VUM1 108 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 LRRTM3Q86VH5 581 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 CATSPER3Q86XQ3 398 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 ZCCHC9Q8N567 271 aaKnown RBP10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 LRRC15Q8TF66 581 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 ERLEC1Q96DZ1 483 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 ZBTB45Q96K62 511 aaPredicted RBP10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 ARHGEF4Q9NR80 690 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 BTBD3Q9Y2F9 522 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 COL6A6A6NMZ7 2263 aa10.45□□□□□ -0.74
SMARCB1-206ENST00000477836 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 C2orf78A6NCI8 922 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 GOLGA6L22H0YM25 854 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 TNFSF14O43557 240 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 CYP17A1P05093 508 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 HOXB2P14652 356 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 GRIA2P42262 883 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 IL12RB1P42701 662 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 WASP42768 502 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 TNFRSF4P43489 277 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 PEX3P56589 373 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 LILRA4P59901 499 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 SMARCB1Q12824 385 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 LY6DQ14210 128 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 KCNB1Q14721 858 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 HLA-BQ31612 363 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 FOXD4L6Q3SYB3 417 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 PREPLQ4J6C6 727 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms