RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 DEFB129Q9H1M3 183 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 ATPIF1Q9UII2 106 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 GNPTGQ9UJJ9 305 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 ABCB11O95342 1321 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 K7EPI3 171 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 TMCC2O75069 709 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 RSL1D1O76021 490 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 CYP3A4P08684 503 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 CIITAP33076 1130 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 EPS15P42566 896 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 CREB5Q02930 508 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 PDE4DQ08499 809 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 THOC5Q13769 683 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 LRRC14Q15048 493 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 INSCQ1MX18 579 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 TRMT5Q32P41 509 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 SLC30A10Q6XR72 485 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 USP43Q70EL4 1123 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 PLPP6Q8IY26 295 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 HACE1Q8IYU2 909 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 PNMA5Q96PV4 448 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 DHRS9Q9BPW9 319 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 ZFP69BQ9UJL9 534 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 GDAQ9Y2T3 454 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 PCDHGA11Q9Y5H2 935 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 CEPT1Q9Y6K0 416 aa13.21□□□□□ -0.3
RTFDC1-207ENST00000477573 RBAK-RBAKDNI3L0D1 243 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 GYG2O15488 501 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 KCNJ13O60928 360 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 TRPA1O75762 1119 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 TSPAN9O75954 239 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 EGFRP00533 1210 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 NAGAP17050 411 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 CES1P23141 567 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 IFNA8P32881 189 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 SLC1A1P43005 524 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 ATP6V0D1P61421 351 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 PRR16Q569H4 304 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 HYIQ5T013 277 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 TMCO4Q5TGY1 634 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 AAGABQ6PD74 315 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 VSTM1Q6UX27 236 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 RGS9BPQ6ZS82 235 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 AHI1Q8N157 1196 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 LRRC15Q8TF66 581 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 PLVAPQ9BX97 442 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 CCDC113Q9H0I3 377 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 SLC38A10Q9HBR0 1119 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 MOV10Q9HCE1 1003 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 BLOC1S4Q9NUP1 217 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 ARHGAP20Q9P2F6 1191 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 SSU72P8A0A1W2PR75 194 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 HAUS5O94927 633 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 TNFAIP8O95379 198 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 CFBP00751 764 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 TAC1P20366 129 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 IL32P24001 234 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 DRG2P55039 364 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 COX10Q12887 443 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 COG2Q14746 738 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 RGS21Q2M5E4 152 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 MMEL1Q495T6 779 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 VPS52Q8N1B4 723 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 PPP4R1Q8TF05 950 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 RUNDC3BQ96NL0 473 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 SERPINB12Q96P63 405 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 ERGIC2Q96RQ1 377 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 PSD2Q9BQI7 771 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 ZDHHC18Q9NUE0 388 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 IGSF9Q9P2J2 1179 aa13.2□□□□□ -0.3
RTFDC1-207ENST00000477573 C2CD2LO14523 706 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 SLC22A1O15245 554 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 ICMTO60725 284 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 GUCY1B2O75343 617 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 PALMO75781 387 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 P4HA1P13674 534 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 APLP1P51693 650 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 IRX4P78413 519 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 NAB2Q15742 525 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms