RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PRMT8Q9NR22 394 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 METTL5Q9NRN9 209 aaKnown RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 USP18Q9UMW8 372 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 NDRG2Q9UN36 371 aaKnown RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 SMG5Q9UPR3 1016 aaKnown RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 DERAQ9Y315 318 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 PCDHB6Q9Y5E3 794 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 PIAS3Q9Y6X2 628 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 NOTCH4Q99466 2003 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 HNRNPDLO14979 420 aaKnown RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 OGTO15294 1046 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 CHADO15335 359 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 TBCAO75347 108 aaKnown RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 CDC25CP30307 473 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 GSTT1P30711 240 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 ATP2C1P98194 919 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 POU5F1Q01860 360 aaKnown RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 SOX4Q06945 474 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 GPR17Q13304 367 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 SLC10A6Q3KNW5 377 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 OVOS1Q6IE37 1185 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 CD300LGQ6UXG3 332 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 SYNPOQ8N3V7 929 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 MYCT1Q8N699 235 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 SUMF1Q8NBK3 374 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 TMEM161BQ8NDZ6 487 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 DDX1Q92499 740 aaKnown RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 KCNN1Q92952 543 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 RMDN1Q96DB5 314 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 RUSC1Q9BVN2 902 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 LMAN1LQ9HAT1 526 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 PARVGQ9HBI0 331 aa7.85□□□□□ -1.15
BRCA1-214ENST00000477152 R3HCC1Q9Y3T6 440 aaKnown RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-214ENST00000477152 VWA3AA6NCI4 1184 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 LILRB5O75023 590 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ATG13O75143 517 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 EDN1P05305 212 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 NCKAP1LP55160 1127 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 POSTNQ15063 836 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 RSPO4Q2I0M5 234 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 SLC5A9Q2M3M2 681 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 PERM1Q5SV97 790 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 RALGPS2Q86X27 583 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 MAP4K3Q8IVH8 894 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 DCP1BQ8IZD4 617 aaKnown RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 SPEM1Q8N4L4 309 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ST13P5Q8NFI4 369 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 CCDC26Q8TAB7 109 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 C18orf25Q96B23 403 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ZMAT2Q96NC0 199 aaKnown RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 MSTO1Q9BUK6 570 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ASB7Q9H672 318 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 POLD4Q9HCU8 107 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 DLL3Q9NYJ7 618 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 CCDC39Q9UFE4 941 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 EXOC7Q9UPT5 735 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 YIPF1Q9Y548 306 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TCHHQ07283 1943 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TICRRQ7Z2Z1 1910 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 RIF1Q5UIP0 2472 aaKnown RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TTC26A0AVF1 554 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 HEPACAM2A8MVW5 462 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 H3BM21 787 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 K7ENM7 598 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 LRRN2O75325 713 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 SEC24AO95486 1093 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 RETP07949 1114 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 CXCL8P10145 99 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 CD72P21854 359 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 DDX6P26196 483 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 PNPLA4P41247 253 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TOB1P50616 345 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 MTAPQ13126 283 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 MAPK7Q13164 816 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TMEM132DQ14C87 1099 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TEAD2Q15562 447 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 CEP135Q66GS9 1140 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 VITQ6UXI7 678 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 MAML2Q8IZL2 1156 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 DAW1Q8N136 415 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 NELL1Q92832 810 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 HVCN1Q96D96 273 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ZBTB45Q96K62 511 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 PLA2G2FQ9BZM2 168 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 CXCL16Q9H2A7 254 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ATXN3LQ9H3M9 355 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 ZHX3Q9H4I2 956 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 TBX20Q9UMR3 447 aa7.84□□□□□ -1.15
BRCA1-214ENST00000477152 MTF2Q9Y483 593 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-214ENST00000477152 NUP210Q8TEM1 1887 aaPredicted RBP7.84□□□□□ -1.16
BRCA1-214ENST00000477152 CACNA1IQ9P0X4 2223 aa7.84□□□□□ -1.16
BRCA1-214ENST00000477152 WDFY4Q6ZS81 3184 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 PDE2AO00408 941 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SIN3BO75182 1162 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 IL18RAPO95256 599 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 PIGRP01833 764 aa7.83□□□□□ -1.16
BRCA1-214ENST00000477152 LONP1P36776 959 aaKnown RBP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 AARSP49588 968 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-214ENST00000477152 SLC12A3P55017 1021 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms