RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	PDGFRL	Q15198	375 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	ITPRIPL2	Q3MIP1	535 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	CCDC40	Q4G0X9	1142 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	TXNDC8	Q6A555	127 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	FOXR2	Q6PJQ5	311 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	FAM35A	Q86V20	835 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	RALGPS2	Q86X27	583 aa	Predicted RBP	10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	C1orf210	Q8IVY1	113 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	TTLL2	Q9BWV7	592 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	SLC46A2	Q9BY10	475 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	SEMA4A	Q9H3S1	761 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	DPEP3	Q9H4B8	488 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	FBXO44	Q9H4M3	255 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	RAB20	Q9NX57	234 aa		10.85	□□□□□ -0.67
CCM2-208	ENST00000476594	MIA3	Q5JRA6	1907 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	AP1G2	O75843	785 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	PRAMEF12	O95522	483 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	GNA14	O95837	355 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	ABL1	P00519	1130 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	FAM200B	P0CF97	657 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	HDC	P19113	662 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	TARS	P26639	723 aa	Known RBP	10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	YWHAQ	P27348	245 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	ASPA	P45381	313 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	RAP1GAP	P47736	663 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	IFNAR2	P48551	515 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	MRE11	P49959	708 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	NDST1	P52848	882 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	CDH8	P55286	799 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	PPP3CA	Q08209	521 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	INCA1	Q0VD86	236 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	IFRD2	Q12894	506 aa	Predicted RBP	10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	MTF1	Q14872	753 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	DGKK	Q5KSL6	1271 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	SCARA3	Q6AZY7	606 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	FILIP1	Q7Z7B0	1213 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	ACOT1	Q86TX2	421 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	CRYBG2	Q8N1P7	616 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	CPA6	Q8N4T0	437 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	KIAA1958	Q8N8K9	716 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	CCDC26	Q8TAB7	109 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	TAS1R2	Q8TE23	839 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	ATP2A3	Q93084	1043 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	FBXO32	Q969P5	355 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	ZNF518B	Q9C0D4	1074 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	KRT82	Q9NSB4	513 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	MAN1B1	Q9UKM7	699 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	FBXO4	Q9UKT5	387 aa		10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	NDRG2	Q9UN36	371 aa	Known RBP	10.84	□□□□□ -0.67
CCM2-208	ENST00000476594	WDFY4	Q6ZS81	3184 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	SPECC1L-ADORA2A	F8WAN1	911 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	NRG2	O14511	850 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	SLC9A3R1	O14745	358 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	CCDC192	P0DO97	292 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	TCF3	P15923	654 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	CD58	P19256	250 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	CD72	P21854	359 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	TBXAS1	P24557	533 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	NBL1	P41271	181 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	MCCD1	P59942	119 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	PAK1	Q13153	545 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	CCDC142	Q17RM4	750 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	ZNF528	Q3MIS6	628 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	C1orf220	Q5T0J3	134 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	ANKRD40	Q6AI12	368 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	SPOPL	Q6IQ16	392 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	KLHL10	Q6JEL2	608 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	FRMD5	Q7Z6J6	570 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	TMEM150A	Q86TG1	271 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	TADA2B	Q86TJ2	420 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	ALYREF	Q86V81	257 aa	Known RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	SYNPO	Q8N3V7	929 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	USP13	Q92995	863 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	NKD2	Q969F2	451 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	CLDN23	Q96B33	292 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	B3GNT5	Q9BYG0	378 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	NACA2	Q9H009	215 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	PNPLA8	Q9NP80	782 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	GKN1	Q9NS71	199 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	DLGAP2	Q9P1A6	1054 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	ARHGAP26	Q9UNA1	814 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	NCAN	O14594	1321 aa		10.83	□□□□□ -0.68
CCM2-208	ENST00000476594	F5	P12259	2224 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	ZNF840P	A6NDX5	716 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	PROB1	E7EW31	1015 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	GOLGA6L22	H0YM25	854 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	ARNTL	O00327	626 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	CLDN5	O00501	218 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	P4HA2	O15460	535 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	CILP	O75339	1184 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	TADA3	O75528	432 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	NFATC1	O95644	943 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	CTH	P32929	405 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	TUB	P50607	506 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	CCR3	P51677	355 aa		10.82	□□□□□ -0.68
CCM2-208	ENST00000476594	SLC5A3	P53794	718 aa		10.82	□□□□□ -0.68

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