RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 FUBP3Q96I24 572 aaKnown RBP eCLIP17.05■□□□□ 0.32
ITGB1-211ENST00000475184 ZSCAN31Q96LW9 406 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-211ENST00000475184 BCCIPQ9P287 314 aaKnown RBP eCLIP17.05■□□□□ 0.32
ITGB1-211ENST00000475184 HELZ2Q9BYK8 2649 aaKnown RBP17.04■□□□□ 0.32
ITGB1-211ENST00000475184 ATXN2Q99700 1313 aaKnown RBP17.04■□□□□ 0.32
ITGB1-211ENST00000475184 KLF8O95600 359 aaPredicted RBP17.04■□□□□ 0.32
ITGB1-211ENST00000475184 ITGB3P05106 788 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 CFIP05156 583 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 ZXDBP98169 803 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 TFAMQ00059 246 aaKnown RBP17.04■□□□□ 0.32
ITGB1-211ENST00000475184 SPDYCQ5MJ68 293 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 MCTP1Q6DN14 999 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 SFTPA1Q8IWL2 248 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 FRMD1Q8N878 549 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 IL17RCQ8NAC3 791 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 SPATA18Q8TC71 538 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 AK8Q96MA6 479 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 IKZF4Q9H2S9 585 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 ST6GALNAC4Q9H4F1 302 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 POLMQ9NP87 494 aaPredicted RBP17.04■□□□□ 0.32
ITGB1-211ENST00000475184 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 MBD1Q9UIS9 605 aaPredicted RBP17.04■□□□□ 0.32
ITGB1-211ENST00000475184 PILRBQ9UKJ0 227 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
ITGB1-211ENST00000475184 FLNBO75369 2602 aaKnown RBP17.03■□□□□ 0.32
ITGB1-211ENST00000475184 MYMKA6NI61 221 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 H0Y626 953 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 SGK1O00141 431 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 LEFTY2O00292 366 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 TRIM16O95361 564 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 CHRM1P11229 460 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-211ENST00000475184 PFKLP17858 780 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 PCSK1P29120 753 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 ADSSP30520 456 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 HOXD12P35452 270 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 TIE1P35590 1138 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 UBA7P41226 1012 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 MAGEA11P43364 429 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 ATXN3P54252 364 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-211ENST00000475184 WNT7BP56706 349 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 MESP2Q0VG99 397 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 MCM6Q14566 821 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 MAP7D1Q3KQU3 841 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 HSF5Q4G112 596 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-211ENST00000475184 PEAR1Q5VY43 1037 aaPredicted RBP17.03■□□□□ 0.32
ITGB1-211ENST00000475184 FILIP1Q7Z7B0 1213 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 OSTM1Q86WC4 334 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 ADGRF2Q8IZF7 708 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 HDDC3Q8N4P3 179 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 LRRC52Q8N7C0 313 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 C1orf127Q8N9H9 656 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 HMGB4Q8WW32 186 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 PLXNB3Q9ULL4 1909 aa17.03■□□□□ 0.32
ITGB1-211ENST00000475184 BPTFQ12830 3046 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 TAF4O00268 1085 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.32
ITGB1-211ENST00000475184 HCRTO43612 131 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 KAT7O95251 611 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 PLCG1P19174 1290 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 ITPKAP23677 461 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 RDXP35241 583 aaKnown RBP17.02■□□□□ 0.32
ITGB1-211ENST00000475184 LHX1P48742 406 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 BYSLQ13895 437 aaKnown RBP17.02■□□□□ 0.32
ITGB1-211ENST00000475184 POSTNQ15063 836 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 EOGTQ5NDL2 527 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 KIAA1958Q8N8K9 716 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 RAD54LQ92698 747 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 PNKPQ96T60 521 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 GTPBP2Q9BX10 602 aaKnown RBP17.02■□□□□ 0.32
ITGB1-211ENST00000475184 GDAP2Q9NXN4 497 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 SNX9Q9Y5X1 595 aa17.02■□□□□ 0.32
ITGB1-211ENST00000475184 GOLGA4Q13439 2230 aaKnown RBP17.02■□□□□ 0.32
ITGB1-211ENST00000475184 PTPRBP23467 1997 aa17.02■□□□□ 0.31
ITGB1-211ENST00000475184 KNL1Q8NG31 2342 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 TCRBV21S2A2A0A5A6 115 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 FAM221BA6H8Z2 402 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 SLC9A3R1O14745 358 aaPredicted RBP17.01■□□□□ 0.31
ITGB1-211ENST00000475184 GABRDO14764 452 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 APODP05090 189 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 EIF2DP41214 584 aaKnown RBP17.01■□□□□ 0.31
ITGB1-211ENST00000475184 KIR2DL1P43626 348 aaPredicted RBP17.01■□□□□ 0.31
ITGB1-211ENST00000475184 SLC6A11P48066 632 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 SLC7A9P82251 487 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 GFPT1Q06210 699 aaPredicted RBP17.01■□□□□ 0.31
ITGB1-211ENST00000475184 RESTQ13127 1097 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 DHCR24Q15392 516 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 DUOXA1Q1HG43 343 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 C4orf50Q6ZRC1 276 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 PROSER1Q86XN7 944 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 BRSK2Q8IWQ3 736 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 ADGRG2Q8IZP9 1017 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 PGBD3Q8N328 593 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 CHCHD4Q8N4Q1 142 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 TOP6BLQ8N6T0 577 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 CEP76Q8TAP6 659 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
ITGB1-211ENST00000475184 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 SPATA17Q96L03 361 aa17.01■□□□□ 0.31
ITGB1-211ENST00000475184 FAM213AQ9BRX8 229 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms