RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 GFRA3O60609 400 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 TCF3P15923 654 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 HDCP19113 662 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 CD72P21854 359 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 CCNE1P24864 410 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 GCLMP48507 274 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 NRLP54845 237 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 NR1H3Q13133 447 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 MAMSTRQ6ZN01 415 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 CRYBG2Q8N1P7 616 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 SYNPOQ8N3V7 929 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 USP13Q92995 863 aaPredicted RBP21.76■■□□□ 1.07
SNX13-206ENST00000474067 NT5C1AQ9BXI3 368 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 DENND4CQ5VZ89 1909 aa21.76■■□□□ 1.07
SNX13-206ENST00000474067 TICRRQ7Z2Z1 1910 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 SPECC1L-ADORA2AF8WAN1 911 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 YWHAQP27348 245 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
SNX13-206ENST00000474067 CCR3P51677 355 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 MCCD1P59942 119 aaPredicted RBP21.75■■□□□ 1.07
SNX13-206ENST00000474067 CETN1Q12798 172 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 RUNX3Q13761 415 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 TCERG1LQ5VWI1 586 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 FOXR2Q6PJQ5 311 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 FAM35AQ86V20 835 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 CPA6Q8N4T0 437 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 FBXL13Q8NEE6 735 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 CCDC26Q8TAB7 109 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 ATP2A3Q93084 1043 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 CHRDQ9H2X0 955 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 DPEP3Q9H4B8 488 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 FBXO44Q9H4M3 255 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 CHMP5Q9NZZ3 219 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 ARHGAP26Q9UNA1 814 aa21.75■■□□□ 1.07
SNX13-206ENST00000474067 ZNF638Q14966 1978 aaKnown RBP21.74■■□□□ 1.07
SNX13-206ENST00000474067 TRIM49P0CI25 452 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 TRIM49CP0CI26 452 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 CTHP32929 405 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 IFNAR2P48551 515 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 NDST1P52848 882 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 CDH8P55286 799 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 YWHAEP62258 255 aaKnown RBP21.74■■□□□ 1.07
SNX13-206ENST00000474067 INCA1Q0VD86 236 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 MTF1Q14872 753 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 SMYD4Q8IYR2 804 aaPredicted RBP21.74■■□□□ 1.07
SNX13-206ENST00000474067 ADSSL1Q8N142 457 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 RSPRY1Q96DX4 576 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 CEP63Q96MT8 703 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 B3GNT5Q9BYG0 378 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 ZNF518BQ9C0D4 1074 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 MMRN2Q9H8L6 949 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 GKN1Q9NS71 199 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 ARMCX3Q9UH62 379 aaPredicted RBP21.74■■□□□ 1.07
SNX13-206ENST00000474067 PTPRDP23468 1912 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 NCANO14594 1321 aa21.74■■□□□ 1.07
SNX13-206ENST00000474067 SLC9A3R1O14745 358 aaPredicted RBP21.73■■□□□ 1.07
SNX13-206ENST00000474067 TADA3O75528 432 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 AP1G2O75843 785 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 FAM200BP0CF97 657 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 ASPAP45381 313 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 RAP1GAPP47736 663 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 PPP3CAQ08209 521 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 DCAF17Q5H9S7 520 aaPredicted RBP21.73■■□□□ 1.07
SNX13-206ENST00000474067 ACOT1Q86TX2 421 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 TAS1R2Q8TE23 839 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 FBXO32Q969P5 355 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 FAM83CQ9BQN1 747 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 LMAN1LQ9HAT1 526 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 RAB20Q9NX57 234 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 MTF2Q9Y483 593 aaPredicted RBP21.73■■□□□ 1.07
SNX13-206ENST00000474067 PCDHGA2Q9Y5H1 932 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 OBSL1O75147 1896 aa21.73■■□□□ 1.07
SNX13-206ENST00000474067 COL4A2P08572 1712 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 FGFR1OPO95684 399 aaKnown RBP21.72■■□□□ 1.07
SNX13-206ENST00000474067 SP9P0CG40 484 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 SLC8A3P57103 927 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 UBE2HP62256 183 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 GRSF1Q12849 480 aaKnown RBP eCLIP21.72■■□□□ 1.07
SNX13-206ENST00000474067 CCDC142Q17RM4 750 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 C1orf220Q5T0J3 134 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 ARL14EPQ8N8R7 260 aaPredicted RBP21.72■■□□□ 1.07
SNX13-206ENST00000474067 TRIML1Q8N9V2 468 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 OSCP1Q8WVF1 389 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 ATRIPQ8WXE1 791 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 SMG9Q9H0W8 520 aaKnown RBP21.72■■□□□ 1.07
SNX13-206ENST00000474067 PNPLA8Q9NP80 782 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 DUS2Q9NX74 493 aaKnown RBP21.72■■□□□ 1.07
SNX13-206ENST00000474067 GTSE1Q9NYZ3 720 aa21.72■■□□□ 1.07
SNX13-206ENST00000474067 ATG13O75143 517 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 LRRN2O75325 713 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 NFATC1O95644 943 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 GNA14O95837 355 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 ABL1P00519 1130 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 TUBP50607 506 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 TAF10Q12962 218 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 USP4Q13107 963 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 FRMD5Q7Z6J6 570 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 GPIHBP1Q8IV16 184 aa21.71■■□□□ 1.07
SNX13-206ENST00000474067 ZC3H3Q8IXZ2 948 aaKnown RBP21.71■■□□□ 1.07
SNX13-206ENST00000474067 ZFYVE19Q96K21 471 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms