RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 SELENOSQ9BQE4 189 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 TRAIPQ9BWF2 469 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 MAK16Q9BXY0 300 aaKnown RBP5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 SNX25Q9H3E2 840 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 NGRNQ9NPE2 291 aaKnown RBP5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 ASNSD1Q9NWL6 643 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 CWC15Q9P013 229 aaKnown RBP5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 CALCOCO1Q9P1Z2 691 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 USP18Q9UMW8 372 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 UBQLN1Q9UMX0 589 aaKnown RBP5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 GABRQQ9UN88 632 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 IPPQ9Y573 584 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 NME7Q9Y5B8 376 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 MUC3AQ02505 3323 aa5.11□□□□□ -1.59
TM4SF1-202ENST00000472441 MEIS3P2A8K0S8 358 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 KPNA7A9QM74 516 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 GOLGA8MH3BSY2 632 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 M0QZ92 97 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 HAS3O00219 553 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 RASGRF2O14827 1237 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SPTLC1O15269 473 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 TP73O15350 636 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 EIF3HO15372 352 aaKnown RBP eCLIP5.1□□□□□ -1.594e-7■■□□□ 13.4
TM4SF1-202ENST00000472441 MAP3K6O95382 1288 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 PFKMP08237 780 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 GNAT1P11488 350 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 AKR1A1P14550 325 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 GPD1P21695 349 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 MDH1P40925 334 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CRYBB1P53674 252 aaPredicted RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CDH6P55285 790 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 PPP2R2AP63151 447 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ADAM17P78536 824 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 IFI35P80217 286 aaPredicted RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SKOR1P84550 965 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 PURAQ00577 322 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 OTUD4Q01804 1114 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SLC25A11Q02978 314 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 LMNB2Q03252 620 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SOX4Q06945 474 aaPredicted RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 MTM1Q13496 603 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ZBTB6Q15916 424 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 NBPF20Q3BBV1 942 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 LRRC38Q5VT99 294 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CYP4F22Q6NT55 531 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SYDE1Q6ZW31 735 aaPredicted RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ARFGAP2Q8N6H7 521 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 NIPA2Q8N8Q9 360 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 RNF169Q8NCN4 708 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ARRDC4Q8NCT1 418 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 TRPV1Q8NER1 839 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ACTL9Q8TC94 416 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 USP6NLQ92738 828 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SLCO2A1Q92959 643 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 MCRS1Q96EZ8 462 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 FAXDC2Q96IV6 333 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 KATNAL1Q9BW62 490 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 AAASQ9NRG9 546 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 GPATCH2LQ9NWQ4 482 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 KIAA1257Q9ULG3 409 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 FOXO6A8MYZ6 492 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 E7EVH7 732 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 NDUFAB1O14561 156 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 PRPSAP2O60256 369 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SHOX2O60902 331 aaPredicted RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 HUS1O60921 280 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 TRUB2O95900 331 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 IVLP07476 585 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 FGFR1P11362 822 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 IGFBP6P24592 240 aaPredicted RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ACAT1P24752 427 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 AXLP30530 894 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 LSP1P33241 339 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 GABRB2P47870 512 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 COPS2P61201 443 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SF3A3Q12874 501 aaKnown RBP eCLIP5.1□□□□□ -1.594e-12■■□□□ 11.7
TM4SF1-202ENST00000472441 TRIM32Q13049 653 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CCDC142Q17RM4 750 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SYCP2LQ5T4T6 812 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 AGBL2Q5U5Z8 902 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 TRNP1Q6NT89 227 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 C1orf228Q6PIY5 440 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 NPNTQ6UXI9 565 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ALKAL1Q6UXT8 129 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 ZC3H18Q86VM9 953 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 APPL2Q8NEU8 664 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CLEC4CQ8WTT0 213 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 LRRN4Q8WUT4 740 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SOCS4Q8WXH5 440 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 LPPQ93052 612 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 MRRFQ96E11 262 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CNTN3Q9P232 1028 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 TBK1Q9UHD2 729 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 LCMT1Q9UIC8 334 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 DERAQ9Y315 318 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 CDY2AQ9Y6F7 541 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 GRIN2DO15399 1336 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 SYNJ2BP-COX16A0A087WUM0 186 aa5.1□□□□□ -1.59
TM4SF1-202ENST00000472441 C3orf70A6NLC5 250 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms