RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 EPHB3P54753 998 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 ADKP55263 362 aaKnown RBP16.06■□□□□ 0.16
NPHP4-205ENST00000466897 GSDMDP57764 484 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 FMO1Q01740 532 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 PPM1LQ5SGD2 360 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 WDR59Q6PJI9 974 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 SPATA31D4Q6ZUB0 917 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 KCTD13Q8WZ19 329 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 AGPAT1Q99943 283 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 IGFLR1Q9H665 355 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 HAUS4Q9H6D7 363 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 ZNHIT6Q9NWK9 470 aaKnown RBP16.06■□□□□ 0.16
NPHP4-205ENST00000466897 COMMD8Q9NX08 183 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 SSU72P8A0A1W2PR75 194 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 HHLA1C9JL84 531 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 TNFRSF10BO14763 440 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 BEST1O76090 585 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 LRG1P02750 347 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 CYP1A1P04798 512 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-205ENST00000466897 MMEP08473 750 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 CHRNB2P17787 502 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 MAP3K7CLP57077 242 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 PDE4CQ08493 712 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 TWF1Q12792 350 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 VEPH1Q14D04 833 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 PPP1R2P3Q6NXS1 205 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 ANKRD54Q6NXT1 300 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 LLGL2Q6P1M3 1020 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 ITIH5Q86UX2 942 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 TMEM35BQ8NCS4 154 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 OLIG1Q8TAK6 271 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 SLC20A1Q8WUM9 679 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 PSMG2Q969U7 264 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 TRMT2BQ96GJ1 504 aaKnown RBP16.05■□□□□ 0.16
NPHP4-205ENST00000466897 PDLIM2Q96JY6 352 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 KCNK16Q96T55 309 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 PRKD2Q9BZL6 878 aa16.05■□□□□ 0.16
NPHP4-205ENST00000466897 LINC01565O15544 149 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 XYLBO75191 536 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 TBX10O75333 385 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 CSH1P0DML2 217 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 CSH2P0DML3 217 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 NOMO3P69849 1222 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 RBM10P98175 930 aaKnown RBP16.04■□□□□ 0.16
NPHP4-205ENST00000466897 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-205ENST00000466897 DDR2Q16832 855 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 RAB41Q5JT25 222 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 DENND1BQ6P3S1 775 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 ZNF571Q7Z3V5 609 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-205ENST00000466897 PIGZQ86VD9 579 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 VPS36Q86VN1 386 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 SCN4BQ8IWT1 228 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 SCML4Q8N228 414 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 LEMD2Q8NC56 503 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 UBA3Q8TBC4 463 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
NPHP4-205ENST00000466897 MYRFLQ96LU7 910 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 NOX5Q96PH1 765 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 IL37Q9NZH6 218 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 CLEC1BQ9P126 229 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 ARHGAP20Q9P2F6 1191 aa16.04■□□□□ 0.16
NPHP4-205ENST00000466897 NCANO14594 1321 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 DOCK6Q96HP0 2047 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 FAM92AA1XBS5 289 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 SOAT2O75908 522 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 RTN3O95197 1032 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-205ENST00000466897 CFHP08603 1231 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-205ENST00000466897 LTBRP36941 435 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 ACADSBP45954 432 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 GPR15P49685 360 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 EPHA5P54756 1037 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 SNX16P57768 344 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 CENPCQ03188 943 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 ITIH3Q06033 890 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 PDCLQ13371 301 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 TDRD12Q587J7 1177 aaKnown RBP16.03■□□□□ 0.16
NPHP4-205ENST00000466897 TAF3Q5VWG9 929 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 SYCE2Q6PIF2 218 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 DENND5BQ6ZUT9 1274 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 NUP93Q8N1F7 819 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 ELMOD1Q8N336 334 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 WDTC1Q8N5D0 677 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 SPC24Q8NBT2 197 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 SLC30A5Q8TAD4 765 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-205ENST00000466897 MSLNLQ96KJ4 702 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 SLC4A5Q9BY07 1137 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 PDCL3Q9H2J4 239 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 FBXO44Q9H4M3 255 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-205ENST00000466897 CLDND1Q9NY35 253 aa16.03■□□□□ 0.16
NPHP4-205ENST00000466897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-205ENST00000466897 CCDC195A0A1B0GUA6 201 aa16.02■□□□□ 0.16
NPHP4-205ENST00000466897 SLC38A8A6NNN8 435 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms