RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 MYL6P60660 151 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 USP4Q13107 963 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 TRPC3Q13507 836 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 PKP1Q13835 747 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 EML3Q32P44 896 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 ATL3Q6DD88 541 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 GRAMD1CQ8IYS0 662 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 CPA6Q8N4T0 437 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 POLR3BQ9NW08 1133 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-204ENST00000465441 TRPM5Q9NZQ8 1165 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 RCOR1Q9UKL0 485 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 CFAP45Q9UL16 551 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 GREB1Q4ZG55 1949 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 ANAPC1Q9H1A4 1944 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 TRIM66O15016 1216 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 KLRC4O43908 158 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 EXOC3O60645 756 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 STAU1O95793 577 aaKnown RBP22.25■■□□□ 1.15
CSPG5-204ENST00000465441 TCF3P15923 654 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 CASP4P49662 377 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 TNNC1P63316 161 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 ZXDBP98169 803 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 DNM1Q05193 864 aaKnown RBP22.25■■□□□ 1.15
CSPG5-204ENST00000465441 KCNB1Q14721 858 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 CEP68Q76N32 757 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.25■■□□□ 1.15
CSPG5-204ENST00000465441 SPRYD3Q8NCJ5 442 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 PLEKHO2Q8TD55 490 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 C8orf48Q96LL4 319 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 TTLL2Q9BWV7 592 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 DPEP3Q9H4B8 488 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 SEMA4GQ9NTN9 838 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 NXF1Q9UBU9 619 aaKnown RBP22.25■■□□□ 1.15
CSPG5-204ENST00000465441 ARHGAP26Q9UNA1 814 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 SLC8A2Q9UPR5 921 aa22.25■■□□□ 1.15
CSPG5-204ENST00000465441 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.25■■□□□ 1.15
CSPG5-204ENST00000465441 F8VP50 259 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 LRP3O75074 770 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 ATICP31939 592 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 CEP57L1Q8IYX8 460 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 FAM160A2Q8N612 972 aaPredicted RBP22.24■■□□□ 1.15
CSPG5-204ENST00000465441 CD101Q93033 1021 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 ATP2A3Q93084 1043 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 EXOC4Q96A65 974 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 RNF38Q9H0F5 515 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 XYLT2Q9H1B5 865 aa22.24■■□□□ 1.15
CSPG5-204ENST00000465441 CDV3Q9UKY7 258 aaKnown RBP22.24■■□□□ 1.15
CSPG5-204ENST00000465441 CCDC163A0A0D9SF12 145 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 ZNF840PA6NDX5 716 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 A8MXQ7 604 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 PHACTR2O75167 634 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 PFKLP17858 780 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 CACNA2D1P54289 1103 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 NOP14P78316 857 aaKnown RBP22.23■■□□□ 1.15
CSPG5-204ENST00000465441 STK4Q13043 487 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 NR1H3Q13133 447 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 FBXO43Q4G163 708 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 EZH1Q92800 747 aaPredicted RBP22.23■■□□□ 1.15
CSPG5-204ENST00000465441 PAGE5Q96GU1 130 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 B3GNT5Q9BYG0 378 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 TMEM30AQ9NV96 361 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 EHD2Q9NZN4 543 aa22.23■■□□□ 1.15
CSPG5-204ENST00000465441 DCDC2BA2VCK2 349 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 LEFTY2O00292 366 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 CLDN5O00501 218 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 AXIN1O15169 862 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 C4BPAP04003 597 aaKnown RBP22.22■■□□□ 1.15
CSPG5-204ENST00000465441 SLFN14P0C7P3 912 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 PPP3CCP48454 512 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 PDE6CP51160 858 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 CDH8P55286 799 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 TAF10Q12962 218 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 CSRP2Q16527 193 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 CAMKK1Q8N5S9 505 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 PARD3BQ8TEW8 1205 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 GAB3Q8WWW8 586 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 SYAP1Q96A49 352 aaPredicted RBP22.22■■□□□ 1.15
CSPG5-204ENST00000465441 RTKNQ9BST9 563 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 ZNF518BQ9C0D4 1074 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 DMAC2Q9NW81 257 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 CEP250Q9BV73 2442 aa22.22■■□□□ 1.15
CSPG5-204ENST00000465441 ACTN4O43707 911 aaKnown RBP22.21■■□□□ 1.15
CSPG5-204ENST00000465441 ABL1P00519 1130 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 KMT5BQ4FZB7 885 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 TDRD10Q5VZ19 366 aaKnown RBP22.21■■□□□ 1.15
CSPG5-204ENST00000465441 PRR23CQ6ZRP0 262 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 B3GALNT2Q8NCR0 500 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 KIAA0895Q8NCT3 520 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 RPLP0P6Q8NHW5 317 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 GOLGA5Q8TBA6 731 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 ELMO3Q96BJ8 720 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 VRTNQ9H8Y1 702 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 PTPRDP23468 1912 aa22.21■■□□□ 1.15
CSPG5-204ENST00000465441 LRRIQ3A6PVS8 624 aaPredicted RBP22.2■■□□□ 1.14
CSPG5-204ENST00000465441 RPP40O75818 363 aaKnown RBP22.2■■□□□ 1.14
CSPG5-204ENST00000465441 CLDN10P78369 228 aa22.2■■□□□ 1.14
CSPG5-204ENST00000465441 SLC7A9P82251 487 aa22.2■■□□□ 1.14
CSPG5-204ENST00000465441 PSMD2Q13200 908 aa22.2■■□□□ 1.14
CSPG5-204ENST00000465441 BIRC3Q13489 604 aa22.2■■□□□ 1.14
CSPG5-204ENST00000465441 ADGRG2Q8IZP9 1017 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms