RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PDE12Q6L8Q7 609 aaKnown RBP17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 RNF19BQ6ZMZ0 732 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 PGLYRP2Q96PD5 576 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 KLHL5Q96PQ7 755 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 TSPAN16Q9UKR8 245 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 INTUQ9ULD6 942 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 PCDHGC3Q9UN70 934 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 MYH10P35580 1976 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 SZT2Q5T011 3432 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 MICAL2O94851 1124 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 ABLIM3O94929 683 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 VNN2O95498 520 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 ADORA2BP29275 332 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 NDUFV1P49821 464 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 SMARCB1Q12824 385 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 PKDCCQ504Y2 493 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 DENND1BQ6P3S1 775 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 C4orf50Q6ZRC1 276 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 ATAD1Q8NBU5 361 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 ZNF461Q8TAF7 563 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 PCDHB18PQ96TA0 734 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 RHOBTB2Q9BYZ6 727 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 ZNF518BQ9C0D4 1074 aa17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 TTYH1Q9H313 450 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 ARGLU1Q9NWB6 273 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-203ENST00000465229 CTAGE15A4D2H0 777 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 MTMR11A4FU01 709 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 DDX3XO00571 662 aaKnown RBP eCLIP17.88■□□□□ 0.453e-15■■□□□ 13.5
EXOSC3-203ENST00000465229 CTAGE8P0CG41 777 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 TNFAIP3P21580 790 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 BDNFP23560 247 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 CKAP4Q07065 602 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 TPGS2Q68CL5 300 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 FBXO38Q6PIJ6 1188 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 CTAGE6Q86UF2 777 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 FAM35AQ86V20 835 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 TTC30AQ86WT1 665 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 PALB2Q86YC2 1186 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 SPATA2LQ8IUW3 424 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 CTAGE4Q8IX94 777 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 ANKRD52Q8NB46 1076 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 UBA3Q8TBC4 463 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 MED10Q9BTT4 135 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 EMILIN2Q9BXX0 1053 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 NAGPAQ9UK23 515 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 PCDHB5Q9Y5E4 795 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 CAPN6Q9Y6Q1 641 aa17.88■□□□□ 0.45
EXOSC3-203ENST00000465229 TMEM265A0A087WTH1 108 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ENC1O14682 589 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 CYP2F1P24903 491 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 PASD1Q8IV76 773 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 WDTC1Q8N5D0 677 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 SLC30A5Q8TAD4 765 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 DUSP16Q9BY84 665 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 LHX5Q9H2C1 402 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 CRISPLD1Q9H336 500 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 TMEM30AQ9NV96 361 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ABI2Q9NYB9 513 aaPredicted RBP17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 HESX1Q9UBX0 185 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 AFF4Q9UHB7 1163 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 SNX12Q9UMY4 172 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 M0QYV0 167 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 MOCS3O95396 460 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ADH1AP07327 375 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 TUBBP07437 444 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ATF2P15336 505 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 KLRC2P26717 231 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 GPD2P43304 727 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 CACNA2D1P54289 1103 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ADCY1Q08828 1119 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 TEX35Q5T0J7 233 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ALKBH5Q6P6C2 394 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 C2orf15Q8WU43 125 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 MRPL38Q96DV4 380 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 LRCH3Q96II8 777 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 ABCB6Q9NP58 842 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 KRT82Q9NSB4 513 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 SALL4Q9UJQ4 1053 aa17.87■□□□□ 0.45
EXOSC3-203ENST00000465229 A0A0A6YYK5 440 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 TGM5O43548 720 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 AP1G2O75843 785 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 BEST1O76090 585 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 CYP1A1P04798 512 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 FAM200BP0CF97 657 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 TCP1P17987 556 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 PDE4CQ08493 712 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 DUSP4Q13115 394 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 GRIN2CQ14957 1233 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 IFI16Q16666 785 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 CLEC20AQ6ZU45 233 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 TTC9BQ8N6N2 239 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 SPPL2BQ8TCT7 592 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 SMARCD1Q96GM5 515 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 SMOQ99835 787 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 PRDM12Q9H4Q4 367 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms