RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SYCP3Q8IZU3 236 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 KBTBD7Q8WVZ9 684 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 MYLPFQ96A32 169 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 CEP295NLQ96MC4 621 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 SYT15Q9BQS2 421 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 FGFBP2Q9BYJ0 223 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 MAGEC2Q9UBF1 373 aaPredicted RBP22.19■■□□□ 1.14
CPSF7-209ENST00000463244 FBXO2Q9UK22 296 aaPredicted RBP22.19■■□□□ 1.14
CPSF7-209ENST00000463244 CDH9Q9ULB4 789 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 MMP17Q9ULZ9 603 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.19■■□□□ 1.14
CPSF7-209ENST00000463244 CLIC4Q9Y696 253 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 MYO18AQ92614 2054 aaKnown RBP22.19■■□□□ 1.14
CPSF7-209ENST00000463244 ANTXRLA6NF34 631 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 KHNYNO15037 678 aaKnown RBP22.18■■□□□ 1.14
CPSF7-209ENST00000463244 BCKDHBP21953 392 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 LMO2P25791 158 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 USP46P62068 366 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 PSMC1P62191 440 aaKnown RBP22.18■■□□□ 1.14
CPSF7-209ENST00000463244 ZNF252P-AS1Q0IIN9 211 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 MYO1EQ12965 1108 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 LMBRD2Q68DH5 695 aaPredicted RBP22.18■■□□□ 1.14
CPSF7-209ENST00000463244 DENND5BQ6ZUT9 1274 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 NOC3LQ8WTT2 800 aaKnown RBP22.18■■□□□ 1.14
CPSF7-209ENST00000463244 ANKRD36BP1Q96IX9 119 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 PCIF1Q9H4Z3 704 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 TMEM9BQ9NQ34 198 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 CRTAC1Q9NQ79 661 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 INTS13Q9NVM9 706 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 SRPRBQ9Y5M8 271 aaKnown RBP22.18■■□□□ 1.14
CPSF7-209ENST00000463244 CACNA1EQ15878 2313 aa22.18■■□□□ 1.14
CPSF7-209ENST00000463244 PKD1L2Q7Z442 2459 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 PTPRJQ12913 1337 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 LEFTY2O00292 366 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 BDNFP23560 247 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 GRIK1P39086 918 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 CRY1Q16526 586 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 SH3PXD2AQ5TCZ1 1133 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 CYP2U1Q7Z449 544 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 GPD1LQ8N335 351 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 KIAA1958Q8N8K9 716 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 MDGA1Q8NFP4 955 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 HPDLQ96IR7 371 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 TTLL2Q9BWV7 592 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 TRPM5Q9NZQ8 1165 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 WASF3Q9UPY6 502 aa22.17■■□□□ 1.14
CPSF7-209ENST00000463244 R3HCC1Q9Y3T6 440 aaKnown RBP22.17■■□□□ 1.14
CPSF7-209ENST00000463244 DSPP15924 2871 aaKnown RBP22.17■■□□□ 1.14
CPSF7-209ENST00000463244 PCNX2A6NKB5 2137 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 BAHCC1Q9P281 2608 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 C1QTNF9BB2RNN3 333 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 PATE3B3GLJ2 98 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 CDX4O14627 284 aaPredicted RBP22.16■■□□□ 1.14
CPSF7-209ENST00000463244 CYP17A1P05093 508 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 C1QTNF9P0C862 333 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 IDEP14735 1019 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 TXLNAP40222 546 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 SLC7A9P82251 487 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 MAPRE1Q15691 268 aaKnown RBP22.16■■□□□ 1.14
CPSF7-209ENST00000463244 UNQ6494/PRO21346Q6UXR6 183 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 FILIP1Q7Z7B0 1213 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 CCDC33Q8N5R6 958 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 OR5B17Q8NGF7 314 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 CLIC6Q96NY7 704 aa22.16■■□□□ 1.14
CPSF7-209ENST00000463244 RALYQ9UKM9 306 aaKnown RBP22.16■■□□□ 1.14
CPSF7-209ENST00000463244 TNRC6BQ9UPQ9 1833 aaKnown RBP22.15■■□□□ 1.14
CPSF7-209ENST00000463244 ZNF840PA6NDX5 716 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 PRPF6O94906 941 aaKnown RBP22.15■■□□□ 1.14
CPSF7-209ENST00000463244 CEACAM1P13688 526 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 HNRNPLP14866 589 aaKnown RBP eCLIP22.15■■□□□ 1.14
CPSF7-209ENST00000463244 CSRP1P21291 193 aaKnown RBP22.15■■□□□ 1.14
CPSF7-209ENST00000463244 WARSP23381 471 aaKnown RBP22.15■■□□□ 1.14
CPSF7-209ENST00000463244 ANXA13P27216 316 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 MRPS21P82921 87 aaKnown RBP22.15■■□□□ 1.14
CPSF7-209ENST00000463244 CYP27A1Q02318 531 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 TMEM92Q6UXU6 159 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 ADGRG2Q8IZP9 1017 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 OLIG1Q8TAK6 271 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 PCED1BQ96HM7 432 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 RNF38Q9H0F5 515 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 EHD2Q9NZN4 543 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 PLXND1Q9Y4D7 1925 aa22.15■■□□□ 1.14
CPSF7-209ENST00000463244 TRIM66O15016 1216 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 KIAA0391O15091 583 aaKnown RBP22.14■■□□□ 1.13
CPSF7-209ENST00000463244 OLFM2O95897 454 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 TNNC2P02585 160 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 PDGFRBP09619 1106 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 CHRM1P11229 460 aaPredicted RBP22.14■■□□□ 1.13
CPSF7-209ENST00000463244 PPP3CCP48454 512 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 DHPSP49366 369 aaPredicted RBP22.14■■□□□ 1.13
CPSF7-209ENST00000463244 NOP14P78316 857 aaKnown RBP22.14■■□□□ 1.13
CPSF7-209ENST00000463244 IRX4P78413 519 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 FOXC1Q12948 553 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 DHCR24Q15392 516 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 CCDC73Q6ZRK6 1079 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 MYCBPAPQ8TBZ2 947 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 PANK4Q9NVE7 773 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 FREM2Q5SZK8 3169 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 LAMA5O15230 3695 aa22.14■■□□□ 1.13
CPSF7-209ENST00000463244 VPS37CA5D8V6 355 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms