RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 CACNA1IQ9P0X4 2223 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 PROB1E7EW31 1015 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 HDCP19113 662 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 TARSP26639 723 aaKnown RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 MXI1P50539 228 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 CDH8P55286 799 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 TCERG1LQ5VWI1 586 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 NKD2Q969F2 451 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 RSPRY1Q96DX4 576 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 TTLL2Q9BWV7 592 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 B3GNT5Q9BYG0 378 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 NIF3L1Q9GZT8 377 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 FAM124BQ9H5Z6 455 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 METTL14Q9HCE5 456 aaKnown RBP13.92□□□□□ -0.18
HDAC1-203ENST00000463172 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 FBXO4Q9UKT5 387 aa13.92□□□□□ -0.18
HDAC1-203ENST00000463172 COL4A2P08572 1712 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 BICDL2A1A5D9 508 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ARNTLO00327 626 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 GFRA3O60609 400 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 CCNE1P24864 410 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 YWHAQP27348 245 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ASPAP45381 313 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 IFNAR2P48551 515 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 NDST1P52848 882 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 PPP3CAQ08209 521 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 CETN1Q12798 172 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 NR1H3Q13133 447 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 CCDC142Q17RM4 750 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 DCAF17Q5H9S7 520 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-203ENST00000463172 DGKKQ5KSL6 1271 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ACOT1Q86TX2 421 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 DDX42Q86XP3 938 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ADSSL1Q8N142 457 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 CRYBG2Q8N1P7 616 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 FBXL13Q8NEE6 735 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 OVCA2Q8WZ82 227 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 NT5C1AQ9BXI3 368 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ZNF518BQ9C0D4 1074 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 SMG9Q9H0W8 520 aaKnown RBP13.91□□□□□ -0.18
HDAC1-203ENST00000463172 GKN1Q9NS71 199 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 ARMCX3Q9UH62 379 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-203ENST00000463172 MTF2Q9Y483 593 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-203ENST00000463172 PATJQ8NI35 1801 aa13.91□□□□□ -0.18
HDAC1-203ENST00000463172 HELZP42694 1942 aaKnown RBP13.91□□□□□ -0.18
HDAC1-203ENST00000463172 LRRN2O75325 713 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 AP1G2O75843 785 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 ABL1P00519 1130 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 CTHP32929 405 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 YWHAEP62258 255 aaKnown RBP13.9□□□□□ -0.18
HDAC1-203ENST00000463172 INCA1Q0VD86 236 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 IFRD2Q12894 506 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-203ENST00000463172 RUNX3Q13761 415 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 MTF1Q14872 753 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 C1orf220Q5T0J3 134 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 FRMD5Q7Z6J6 570 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 SYNPOQ8N3V7 929 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 KIAA1958Q8N8K9 716 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 TTC16Q8NEE8 873 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 TAS1R2Q8TE23 839 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 ATP2A3Q93084 1043 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 FBXO32Q969P5 355 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 ZFYVE19Q96K21 471 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 CEP63Q96MT8 703 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 FAM126AQ9BYI3 521 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-203ENST00000463172 CHRDQ9H2X0 955 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 FBXO44Q9H4M3 255 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 LMAN1LQ9HAT1 526 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 KRT82Q9NSB4 513 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 RAB20Q9NX57 234 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
HDAC1-203ENST00000463172 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
HDAC1-203ENST00000463172 NCANO14594 1321 aa13.9□□□□□ -0.19
HDAC1-203ENST00000463172 RIF1Q5UIP0 2472 aaKnown RBP13.89□□□□□ -0.19
HDAC1-203ENST00000463172 KIF26AQ9ULI4 1882 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-203ENST00000463172 ZNF840PA6NDX5 716 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 CLDN5O00501 218 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 SLC9A3R1O14745 358 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-203ENST00000463172 TADA3O75528 432 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
HDAC1-203ENST00000463172 FAM200BP0CF97 657 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 SP9P0CG40 484 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 TCF3P15923 654 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 CCR3P51677 355 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 NRLP54845 237 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 MCCD1P59942 119 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-203ENST00000463172 UBE2HP62256 183 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms