RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 AVENQ9NQS1 362 aaPredicted RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 CNGB3Q9NQW8 809 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 NOD1Q9Y239 953 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 SLC1A6P48664 564 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 PRELID2Q8N945 189 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 ZNF669Q96BR6 464 aaPredicted RBP16.39■□□□□ 0.21
SMC4-204ENST00000462787 ULK4Q96C45 1275 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 ELMO2Q96JJ3 720 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 ZNF518BQ9C0D4 1074 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 EPS8L2Q9H6S3 715 aa16.39■□□□□ 0.21
SMC4-204ENST00000462787 MEI4A8MW99 385 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 NPR1P16066 1061 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 TFE3P19532 575 aaPredicted RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 RPL10AP62906 217 aaKnown RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 KCTD2Q14681 263 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 STXBP2Q15833 593 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 KYAT1Q16773 422 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 EFL1Q7Z2Z2 1120 aaKnown RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 LDHDQ86WU2 507 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 CCDC60Q8IWA6 550 aaPredicted RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 TCF7L2Q9NQB0 619 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 TPST1O60507 370 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 CASP7P55210 303 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 RUNX1T1Q06455 604 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 PRKG1Q13976 671 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 MCOLN2Q8IZK6 566 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 CCDC33Q8N5R6 958 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 AGAP3Q96P47 875 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 RUBCNLQ9H714 662 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ARHGEF38Q9NXL2 777 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 TBX20Q9UMR3 447 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.212e-144■■■■■ 553.7
SMC4-204ENST00000462787 SDR42E2A6NKP2 422 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 TIMM44O43615 452 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 EDF1O60869 148 aaKnown RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 VAV1P15498 845 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 FGFR2P21802 821 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ME2P23368 584 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ACVR2BQ13705 512 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ZNF572Q7Z3I7 529 aaPredicted RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 CDC26Q8NHZ8 85 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 DCUN1D5Q9BTE7 237 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 TMEM109Q9BVC6 243 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 C17orf75Q9HAS0 396 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 SLC39A10Q9ULF5 831 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 SHPRHQ149N8 1683 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 GYS1P13807 737 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 ALDH1A3P47895 512 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 CACNB3P54284 484 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 PPP4CP60510 307 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 RIPOR1Q6ZS17 1223 aa16.38■□□□□ 0.21
SMC4-204ENST00000462787 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
SMC4-204ENST00000462787 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 E2F8A0AVK6 867 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 HEATR9A2RTY3 570 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 NFIBO00712 420 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 RBBP7Q16576 425 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 KCTD21Q4G0X4 260 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 TLCD1Q96CP7 247 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 IFT43Q96FT9 208 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMC4-204ENST00000462787 IGSF9BQ9UPX0 1349 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 CLASP2O75122 1294 aaKnown RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 ZNF554Q86TJ5 538 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 GALNT15Q8N3T1 639 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 TOPORSQ9NS56 1045 aaPredicted RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 SPATA31A3Q5VYP0 1347 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 CFAP99D6REC4 459 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 SSTR1P30872 391 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 XKR3Q5GH77 459 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 TTC27Q6P3X3 843 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 TDRD5Q8NAT2 981 aaKnown RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 ACTL9Q8TC94 416 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 RABGEF1Q9UJ41 708 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 CSADQ9Y600 493 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 C1orf232A0A0U1RR37 186 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 ZNF23P17027 643 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 HADHAP40939 763 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 ELK3P41970 407 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
SMC4-204ENST00000462787 RNF220Q5VTB9 566 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 RTKN2Q8IZC4 609 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 CCDC126Q96EE4 140 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms