RNA–Protein interactions for RNA: ENST00000462440.5

PRUNE1-208, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 5

Gene PRUNE1, Length 732 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-208ENST00000462440 WDR59Q6PJI9 974 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 STKLD1Q8NE28 680 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 OLIG1Q8TAK6 271 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 C8orf48Q96LL4 319 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 AGPAT1Q99943 283 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 SYT11Q9BT88 431 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 PDCL3Q9H2J4 239 aa18.18■□□□□ 0.5
PRUNE1-208ENST00000462440 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 TULP2O00295 520 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 NCK2O43639 380 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 TBX10O75333 385 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 LRG1P02750 347 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 PLEKP08567 350 aaPredicted RBP18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 ANXA13P27216 316 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 HOXA9P31269 272 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 SLC8A3P57103 927 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 PLD1Q13393 1074 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 RTL10Q7L3V2 364 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 ZNF571Q7Z3V5 609 aaPredicted RBP18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 GPR152Q8TDT2 470 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 SFXN1Q9H9B4 322 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 ZNHIT6Q9NWK9 470 aaKnown RBP18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 ZDHHC7Q9NXF8 308 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 CLDND1Q9NY35 253 aa18.17■□□□□ 0.5
PRUNE1-208ENST00000462440 HHLA1C9JL84 531 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 XPO1O14980 1071 aaKnown RBP18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 CCL16O15467 120 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 HNRNPA1P09651 372 aaKnown RBP eCLIP18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 GPD2P43304 727 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 EPHB3P54753 998 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 ANKRD54Q6NXT1 300 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 PIGZQ86VD9 579 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 C12orf76Q8N812 135 aaPredicted RBP18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 GIPC2Q8TF65 315 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 PABPC5Q96DU9 382 aaKnown RBP18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 SPATA17Q96L03 361 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 PANX2Q96RD6 677 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 LHX5Q9H2C1 402 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 CLEC1BQ9P126 229 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 ARHGAP20Q9P2F6 1191 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 CYTH4Q9UIA0 394 aa18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 BZW2Q9Y6E2 419 aaKnown RBP18.16■□□□□ 0.5
PRUNE1-208ENST00000462440 CDH5P33151 784 aaPredicted RBP18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 LTBRP36941 435 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 PLA2G4AP47712 749 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 DLX2Q07687 328 aaPredicted RBP18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 VEPH1Q14D04 833 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 PMF1Q6P1K2 205 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 TRIM72Q6ZMU5 477 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 EP400NLQ6ZTU2 488 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 GPRIN1Q7Z2K8 1008 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 WDTC1Q8N5D0 677 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 C1orf131Q8NDD1 294 aaKnown RBP18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 FEZF2Q8TBJ5 459 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 SLC35F5Q8WV83 523 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 PPM1EQ8WY54 764 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 CEP295NLQ96MC4 621 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 PCDHB18PQ96TA0 734 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 PNPLA8Q9NP80 782 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 SEPT11Q9NVA2 429 aaKnown RBP18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 CEP83Q9Y592 693 aa18.15■□□□□ 0.5
PRUNE1-208ENST00000462440 HELZP42694 1942 aaKnown RBP18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 CCDC195A0A1B0GUA6 201 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 SLC38A8A6NNN8 435 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 TNFRSF10BO14763 440 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 PAPLNO95428 1278 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 LSM8O95777 96 aaKnown RBP18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 CYP1A1P04798 512 aaPredicted RBP18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 TNFAIP3P21580 790 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 RGS7P49802 495 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 SLC5A3P53794 718 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 NOMO3P69849 1222 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 PDCLQ13371 301 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 MTMR3Q13615 1198 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 RARS2Q5T160 578 aaKnown RBP18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 SYCE2Q6PIF2 218 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 TMC5Q6UXY8 1006 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 TMEM35BQ8NCS4 154 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 CMASQ8NFW8 434 aaPredicted RBP18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 ZNF707Q96C28 371 aaPredicted RBP18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 CHP1Q99653 195 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 PRKD2Q9BZL6 878 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 UBXN6Q9BZV1 441 aa18.14■□□□□ 0.49
PRUNE1-208ENST00000462440 FAM170AA1A519 330 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.497e-9■■■■■ 75.8
PRUNE1-208ENST00000462440 XYLBO75191 536 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 GABBR2O75899 941 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 POU2F2P09086 479 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 EIF4A3P38919 411 aaKnown RBP18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 GSDMDP57764 484 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 USP46P62068 366 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 CDK17Q00537 523 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 CLEC16AQ2KHT3 1053 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 NAA35Q5VZE5 725 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 DENND5BQ6ZUT9 1274 aa18.13■□□□□ 0.49
PRUNE1-208ENST00000462440 ITIH5Q86UX2 942 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms