RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 KIAA0100Q14667 2235 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SF3B1O75533 1304 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ESYT3A0FGR9 886 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 GOLGA6BA6NDN3 693 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TMEM191CA6NGB0 347 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 H7C4K7 107 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SGK1O00141 431 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PTGESO14684 152 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 OPA1O60313 960 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SEC31AO94979 1220 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CFHP08603 1231 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM163BP0C2L3 166 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FGFR1P11362 822 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 COL6A1P12109 1028 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 HOXC8P31273 242 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MARCKSL1P49006 195 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TKTL1P51854 596 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 RPL7AP62424 266 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC6A3Q01959 620 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SOX4Q06945 474 aaPredicted RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 NME3Q13232 169 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MTMR3Q13615 1198 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SMTNL2Q2TAL5 461 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 BOLA3Q53S33 107 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 DCAF6Q58WW2 860 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 EFHC2Q5JST6 749 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 EMBQ6PCB8 327 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CCDC137Q6PK04 289 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM183BPQ6ZVS7 135 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SCUBE3Q8IX30 993 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CCHCR1Q8TD31 782 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM172AQ8WUF8 416 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 UBLCP1Q8WVY7 318 aaPredicted RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ANKRD7Q92527 254 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ALG3Q92685 438 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ACSF2Q96CM8 615 aaPredicted RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PPP1R10Q96QC0 940 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ABCB6Q9NP58 842 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CACNG4Q9UBN1 327 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 GRIN2DO15399 1336 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MEIS3P2A8K0S8 358 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 F8VP50 259 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 H3BRJ5 948 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PITPNM1O00562 1244 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TTI1O43156 1089 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 RAD51CO43502 376 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ATP8B1O43520 1251 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 RRP9O43818 475 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 AMHP03971 560 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ERBB2P04626 1255 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PYGMP11217 842 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CYP2C18P33260 490 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PLTPP55058 493 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 NKX3-2P78367 333 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 DEUP1Q05D60 604 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ACAP1Q15027 740 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ZBTB6Q15916 424 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TRIM60Q495X7 471 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC38Q5VT99 294 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 BTBD8Q5XKL5 378 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 LHX8Q68G74 356 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CHRDL2Q6WN34 429 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MRPL10Q7Z7H8 261 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM35AQ86V20 835 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF354CQ86Y25 554 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 KATNAL2Q8IYT4 538 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CRYBG2Q8N1P7 616 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC43Q8N309 656 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PAF1Q8N7H5 531 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 WHAMMQ8TF30 809 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 STK32AQ8WU08 396 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MYLPFQ96A32 169 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SCLYQ96I15 445 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TSPYL1Q9H0U9 437 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 DPEP3Q9H4B8 488 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 NFU1Q9UMS0 254 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SNX24Q9Y343 169 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 E7EVH7 732 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CLDN5O00501 218 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 XPO1O14980 1071 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SPTLC1O15269 473 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 FANCGO15287 622 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 POLR3GO15318 223 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 NCAM1P13591 858 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 BDNFP23560 247 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 LMO2P25791 158 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CDH5P33151 784 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 GPD2P43304 727 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 FNTAP49354 379 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CTCFP49711 727 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF143P52747 638 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 COPS2P61201 443 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 YWHAZP63104 245 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 MGAT3Q09327 533 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 BTG3Q14201 252 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TCEAL1Q15170 157 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 PKN2Q16513 984 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 MGAT5BQ3V5L5 792 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TIGD5Q53EQ6 642 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms