RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 GDF3Q9NR23 364 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.15□□□□□ -1.262e-6■■■■□ 22.5
MSH2-204ENST00000461394 MIOSQ9NXC5 875 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 SAGE1Q9NXZ1 904 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 DDX43Q9NXZ2 648 aaKnown RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 CACNG4Q9UBN1 327 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 PCSK1NQ9UHG2 260 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 LRFN2Q9ULH4 789 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 PTPN22Q9Y2R2 807 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 TCRBV7S2A1N4TA0A589 114 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 POLR3GO15318 223 aaPredicted RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 DAPK3O43293 454 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 SASH3O75995 380 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 TJP3O95049 919 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 ECEL1O95672 775 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 GAS8O95995 478 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 MYBL2P10244 700 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 RARAP10276 462 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 PDGFRAP16234 1089 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 PTPN1P18031 435 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 NDUFV2P19404 249 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 LMO2P25791 158 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 OAS2P29728 719 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 RPL9P32969 192 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 COILP38432 576 aaPredicted RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 ACADSBP45954 432 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 GABRB2P47870 512 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 LHX1P48742 406 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 CDR1P51861 262 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 SLC6A3Q01959 620 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 OGDHQ02218 1023 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 RNASELQ05823 741 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 VAC14Q08AM6 782 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 BFSP2Q13515 415 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 KRT81Q14533 505 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 DSC3Q14574 896 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 TRIM71Q2Q1W2 868 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 SMTNL2Q2TAL5 461 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 PAN2Q504Q3 1202 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 SCYL2Q6P3W7 929 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 EMBQ6PCB8 327 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 GLB1LQ6UWU2 654 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 SPOCD1Q6ZMY3 1216 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 LRRC8DQ7L1W4 858 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 MRPL10Q7Z7H8 261 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 TTC30AQ86WT1 665 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 DDX42Q86XP3 938 aaKnown RBP eCLIP7.14□□□□□ -1.27
MSH2-204ENST00000461394 ECHDC2Q86YB7 292 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 JAMLQ86YT9 394 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 RFX6Q8HWS3 928 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 ABI1Q8IZP0 508 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 SIX6OS1Q8N1H7 587 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 TMEM86AQ8N2M4 240 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 PRELID2Q8N945 189 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 ANKRD52Q8NB46 1076 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 KCTD6Q8NC69 237 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 B3GALNT2Q8NCR0 500 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 HASPINQ8TF76 798 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 AENQ8WTP8 325 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 KBTBD7Q8WVZ9 684 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 RXFP2Q8WXD0 754 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 MCRS1Q96EZ8 462 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 UROC1Q96N76 676 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 DEFB118Q96PH6 123 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 SLITRK1Q96PX8 696 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 SYT15Q9BQS2 421 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 MAK16Q9BXY0 300 aaKnown RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 OSBPL8Q9BZF1 889 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 OSBPL7Q9BZF2 842 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 UNC93B1Q9H1C4 597 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 LRRC4Q9HBW1 653 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 HOMER3Q9NSC5 361 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 ASIC3Q9UHC3 531 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 PHF24Q9UPV7 400 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 NR2E1Q9Y466 385 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 TIMM13Q9Y5L4 95 aaPredicted RBP7.14□□□□□ -1.27
MSH2-204ENST00000461394 SQORQ9Y6N5 450 aa7.14□□□□□ -1.27
MSH2-204ENST00000461394 TSC2P49815 1807 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 A0A0U1RQF3 1178 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 TCRBV5S1A1TA0A578 114 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ARHGEF37A1IGU5 675 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CARNS1A5YM72 827 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 GOLGA6BA6NDN3 693 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 I3L4J1 428 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 TULP2O00295 520 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CLDN5O00501 218 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 FSCN2O14926 492 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PRPSAP2O60256 369 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PQBP1O60828 265 aaKnown RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 ZNF623O75123 536 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ATP2C2O75185 946 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 B3GAT3O94766 335 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PFKMP08237 780 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 FAM200BP0CF97 657 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 KRT10P13645 584 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 TCF4P15884 667 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 SELPP16109 830 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PCSK1P29120 753 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 SDC4P31431 198 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 GBP1P32455 592 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms