RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 PER2O15055 1255 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 SPTLC2O15270 562 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 LINC01565O15544 149 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 LRRN2O75325 713 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 TBX10O75333 385 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 RECQL4O94761 1208 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 MED26O95402 600 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 KRT18P05783 430 aaKnown RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 CTSAP10619 480 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 SCP2P22307 547 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 PROZP22891 400 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 OR1G1P47890 313 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 DLX2Q07687 328 aaPredicted RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 STRN3Q13033 797 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 KCNC3Q14003 757 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 DHX8Q14562 1220 aaKnown RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 SMC1AQ14683 1233 aaKnown RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 ATL3Q6DD88 541 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 CCDC73Q6ZRK6 1079 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 EP400NLQ6ZTU2 488 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 RBM23Q86U06 439 aaKnown RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 VPS52Q8N1B4 723 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 PLD6Q8N2A8 252 aaKnown RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 BCL7CQ8WUZ0 217 aaPredicted RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 DHRS1Q96LJ7 313 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 RPS6KC1Q96S38 1066 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
NUP50-212ENST00000461194 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.54□□□□□ -1.29e-7■■■■□ 25.2
NUP50-212ENST00000461194 ZBP1Q9H171 429 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 CDT1Q9H211 546 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 PARVGQ9HBI0 331 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 MARCH5Q9NX47 278 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 IRAK3Q9Y616 596 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 REV3LO60673 3130 aa7.54□□□□□ -1.2
NUP50-212ENST00000461194 NLRC5Q86WI3 1866 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 A0A1W2PQH9 124 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 PTGESO14684 152 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
NUP50-212ENST00000461194 TBCAO75347 108 aaKnown RBP7.53□□□□□ -1.2
NUP50-212ENST00000461194 CLEC3AO75596 197 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 TOM1L1O75674 476 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CXCL14O95715 111 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 GLP2RO95838 553 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 EFEMP2O95967 443 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 THP07101 528 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 MCF2P10911 925 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 IL9P15248 144 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 ABCD1P33897 745 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CCNFP41002 786 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 STAT6P42226 847 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 NDUFV1P49821 464 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 COASYQ13057 564 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 TUSC3Q13454 348 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 ZNF568Q3ZCX4 644 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 MPZL3Q6UWV2 235 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 TMEM184AQ6ZMB5 413 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 RNF168Q8IYW5 571 aaPredicted RBP7.53□□□□□ -1.2
NUP50-212ENST00000461194 TAB3Q8N5C8 712 aaPredicted RBP7.53□□□□□ -1.2
NUP50-212ENST00000461194 MYCT1Q8N699 235 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 VN1R2Q8NFZ6 395 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 KCNG4Q8TDN1 519 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 MSLNLQ96KJ4 702 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 SLC6A18Q96N87 628 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 FIZ1Q96SL8 496 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 TCHPQ9BT92 498 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CCDC94Q9BW85 323 aaPredicted RBP7.53□□□□□ -1.2
NUP50-212ENST00000461194 COLEC11Q9BWP8 271 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 VN1R3Q9BXE9 311 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CLEC1BQ9P126 229 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CD207Q9UJ71 328 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 CFAP45Q9UL16 551 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 FAM50BQ9Y247 325 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 GDAQ9Y2T3 454 aa7.53□□□□□ -1.2
NUP50-212ENST00000461194 PRG3Q9Y2Y8 225 aaPredicted RBP7.53□□□□□ -1.2
NUP50-212ENST00000461194 A0A087X0B3 334 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.52□□□□□ -1.21
NUP50-212ENST00000461194 MYMKA6NI61 221 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 K7ENM7 598 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 CLDN3O15551 220 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 MBTPS2O43462 519 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 CUTAO60888 179 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 CLASP2O75122 1294 aaKnown RBP7.52□□□□□ -1.21
NUP50-212ENST00000461194 PIGRP01833 764 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 SOD2P04179 222 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 SRGAP2BP0DMP2 458 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 RBM10P98175 930 aaKnown RBP7.52□□□□□ -1.21
NUP50-212ENST00000461194 GTF2BQ00403 316 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 MCL1Q07820 350 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 SMAD4Q13485 552 aaKnown RBP7.52□□□□□ -1.21
NUP50-212ENST00000461194 NOLC1Q14978 699 aaKnown RBP eCLIP7.52□□□□□ -1.21
NUP50-212ENST00000461194 PTPN14Q15678 1187 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 NAB2Q15742 525 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 XKR4Q5GH76 650 aa7.52□□□□□ -1.21
NUP50-212ENST00000461194 AXDND1Q5T1B0 1012 aaPredicted RBP7.52□□□□□ -1.21
NUP50-212ENST00000461194 SHC4Q6S5L8 630 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms