RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 SPATA2LQ8IUW3 424 aaPredicted RBP8.66□□□□□ -1.02
SND1-202ENST00000461056 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
SND1-202ENST00000461056 NPAS3Q8IXF0 933 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 HS6ST3Q8IZP7 471 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 ANKRD52Q8NB46 1076 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 SHKBP1Q8TBC3 707 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 GPR152Q8TDT2 470 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 TCEAL4Q96EI5 215 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 SMARCD1Q96GM5 515 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 FAM81BQ96LP2 452 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 NECTIN4Q96NY8 510 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 MYADMQ96S97 322 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 KCNK16Q96T55 309 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 SEPT5Q99719 369 aaPredicted RBP8.66□□□□□ -1.02
SND1-202ENST00000461056 DUSP16Q9BY84 665 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 STK33Q9BYT3 514 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 UBXN6Q9BZV1 441 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 PNPLA8Q9NP80 782 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 CD320Q9NPF0 282 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 FAM207AQ9NSI2 230 aaPredicted RBP8.66□□□□□ -1.02
SND1-202ENST00000461056 CYTH4Q9UIA0 394 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 KIAA1257Q9ULG3 409 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 PTPRDP23468 1912 aa8.66□□□□□ -1.02
SND1-202ENST00000461056 SLC38A8A6NNN8 435 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 AP1G2O75843 785 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 VDRP11473 427 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 NPR3P17342 541 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 CEBPBP17676 345 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 CHRNB2P17787 502 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 FCARP24071 287 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 GPD2P43304 727 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 YWHAEP62258 255 aaKnown RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 RPL10AP62906 217 aaKnown RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 CYP27A1Q02318 531 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 PLD1Q13393 1074 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 ARID5BQ14865 1188 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 CNGA2Q16280 664 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 FKBP15Q5T1M5 1219 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 ELMSAN1Q6PJG2 1045 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 CREBRFQ8IUR6 639 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 WDTC1Q8N5D0 677 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 EPS8L1Q8TE68 723 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 GIPC2Q8TF65 315 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 SLC35F5Q8WV83 523 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 RNF25Q96BH1 459 aaPredicted RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 CYFIP2Q96F07 1278 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 RIPOR3Q96MK2 946 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 PHF7Q9BWX1 381 aaPredicted RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 XPO4Q9C0E2 1151 aaKnown RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 DMAP1Q9NPF5 467 aaPredicted RBP8.65□□□□□ -1.02
SND1-202ENST00000461056 IFNKQ9P0W0 207 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 EPS15L1Q9UBC2 864 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 PRKAG3Q9UGI9 489 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 TSPAN16Q9UKR8 245 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 PCDHGC3Q9UN70 934 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 USTQ9Y2C2 406 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 PCDHB4Q9Y5E5 795 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
SND1-202ENST00000461056 ITIH6Q6UXX5 1313 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 C2CD4DB7Z1M9 353 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 ANHXE9PGG2 379 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 TRIM66O15016 1216 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 CYP26A1O43174 497 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 OLFM2O95897 454 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 LRG1P02750 347 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 GYPCP04921 128 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 FAM200BP0CF97 657 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 CDK11BP21127 795 aaKnown RBP8.64□□□□□ -1.03
SND1-202ENST00000461056 ADORA2BP29275 332 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 WEE1P30291 646 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 ELF1P32519 619 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 CDH5P33151 784 aaPredicted RBP8.64□□□□□ -1.03
SND1-202ENST00000461056 PLA2G4AP47712 749 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 ALDH1A3P47895 512 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 KIF11P52732 1056 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 SLC5A3P53794 718 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 EPHB3P54753 998 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 POLR2FP61218 127 aaKnown RBP8.64□□□□□ -1.03
SND1-202ENST00000461056 PDE4CQ08493 712 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 ARHGAP44Q17R89 818 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 GOLGA7BQ2TAP0 167 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 MGAT5BQ3V5L5 792 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 PABPC1LQ4VXU2 614 aaKnown RBP8.64□□□□□ -1.03
SND1-202ENST00000461056 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 ATAT1Q5SQI0 421 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
SND1-202ENST00000461056 SNX30Q5VWJ9 437 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 PM20D1Q6GTS8 502 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 DENND1BQ6P3S1 775 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 IRF2BP2Q7Z5L9 587 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 SCD5Q86SK9 330 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 NOP9Q86U38 636 aaKnown RBP8.64□□□□□ -1.03
SND1-202ENST00000461056 SLC47A2Q86VL8 602 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 ADHFE1Q8IWW8 467 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 LEMD2Q8NC56 503 aa8.64□□□□□ -1.03
SND1-202ENST00000461056 SCAMP5Q8TAC9 235 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms