RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 GZF1Q9H116 711 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-209ENST00000460731 CDT1Q9H211 546 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 IKZF4Q9H2S9 585 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 ZHX3Q9H4I2 956 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 GCM1Q9NP62 436 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 RNF19AQ9NV58 838 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 ANO10Q9NW15 660 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 TMEM161AQ9NX61 479 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 RWDD2AQ9UIY3 292 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 CPSF3Q9UKF6 684 aaKnown RBP6.13□□□□□ -1.43
PTPN12-209ENST00000460731 GINS2Q9Y248 185 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 PCDHB2Q9Y5E7 798 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 MYO9BQ13459 2157 aa6.13□□□□□ -1.43
PTPN12-209ENST00000460731 A0A1W2PPC1 479 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 TISP43B9A030 160 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 IKBKBO14920 756 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 HNRNPDLO14979 420 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 TRANK1O15050 2925 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 PMM2O15305 246 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 EXTL3O43909 919 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 SEMA7AO75326 666 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 DGKIO75912 1065 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 LDHAP00338 332 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 ACTN1P12814 892 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 KCNE1P15382 129 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 ZSCAN20P17040 1043 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 SYN1P17600 705 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 RPL13P26373 211 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 TRHRP34981 398 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 LIG4P49917 911 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 HK2P52789 917 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 WDR5P61964 334 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 HSP90AA2PQ14568 343 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 NCAPHQ15003 741 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 LRRC14Q15048 493 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 IQCB1Q15051 598 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 TRIP11Q15643 1979 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 NAB2Q15742 525 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 GAB4Q2WGN9 574 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 SLC10A6Q3KNW5 377 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 AGMOQ6ZNB7 445 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 HS2ST1Q7LGA3 356 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 APBB1IPQ7Z5R6 666 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 FILIP1Q7Z7B0 1213 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 DEFB128Q7Z7B8 93 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 CD302Q8IX05 232 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 PIWIL2Q8TC59 973 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 ELMO3Q96BJ8 720 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 CPB2Q96IY4 423 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 SCLT1Q96NL6 688 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 LBHD1Q9BQE6 289 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 CBWD1Q9BRT8 395 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 EIF2AQ9BY44 585 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 CEP44Q9C0F1 390 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 HSD3B7Q9H2F3 369 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 ASB7Q9H672 318 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 UBN1Q9NPG3 1134 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 AGO2Q9UKV8 859 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 ZMYND8Q9ULU4 1186 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 PIN4Q9Y237 131 aaKnown RBP6.12□□□□□ -1.43
PTPN12-209ENST00000460731 GIT1Q9Y2X7 761 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 IPPQ9Y573 584 aa6.12□□□□□ -1.43
PTPN12-209ENST00000460731 CITO14578 2027 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 COL4A6Q14031 1691 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 BICDL2A1A5D9 508 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 CALUO43852 315 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-209ENST00000460731 TRIM13O60858 407 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 OFD1O75665 1012 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 AKAP3O75969 853 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 GJB5O95377 273 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 CBX7O95931 251 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 EFEMP2O95967 443 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 CST3P01034 146 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-209ENST00000460731 NR3C1P04150 777 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 LINC00271P0C7V0 271 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 STAG3L1P0CL83 205 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 CCDC192P0DO97 292 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 ACRP10323 421 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 ZNF18P17022 549 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 DSC1Q08554 894 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 PAK1Q13153 545 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 ADAM9Q13443 819 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 STIM1Q13586 685 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 SHHQ15465 462 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 ENOX2Q16206 610 aaKnown RBP6.11□□□□□ -1.43
PTPN12-209ENST00000460731 STX1AQ16623 288 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPN12-209ENST00000460731 CLLU1OSQ5K130 101 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 C1orf220Q5T0J3 134 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 SPATA1Q5VX52 437 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 ISM2Q6H9L7 571 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 TWF2Q6IBS0 349 aaKnown RBP6.11□□□□□ -1.43
PTPN12-209ENST00000460731 SASS6Q6UVJ0 657 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 FRMD5Q7Z6J6 570 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 NT5DC4Q86YG4 428 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 NELFCDQ8IXH7 590 aa6.11□□□□□ -1.43
PTPN12-209ENST00000460731 SYCP3Q8IZU3 236 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms