RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 USP17L7P0C7H9 530 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 PTPN1P18031 435 aaKnown RBP23.2■■□□□ 1.3
SEC22C-213ENST00000456222 RAP1GAPP47736 663 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 CDH8P55286 799 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 TNNC1P63316 161 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 MAPRE1Q15691 268 aaKnown RBP23.2■■□□□ 1.3
SEC22C-213ENST00000456222 CC2D1AQ6P1N0 951 aaPredicted RBP23.2■■□□□ 1.3
SEC22C-213ENST00000456222 ERMP1Q7Z2K6 904 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 SH3RF2Q8TEC5 729 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 PARD3BQ8TEW8 1205 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 EZH1Q92800 747 aaPredicted RBP23.2■■□□□ 1.3
SEC22C-213ENST00000456222 TTLL2Q9BWV7 592 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 B3GNT5Q9BYG0 378 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 KCTD10Q9H3F6 313 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 CGNQ9P2M7 1197 aaKnown RBP23.2■■□□□ 1.3
SEC22C-213ENST00000456222 HPSEQ9Y251 543 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 MYOFQ9NZM1 2061 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 VNN1O95497 513 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 STAU1O95793 577 aaKnown RBP23.19■■□□□ 1.3
SEC22C-213ENST00000456222 HDCP19113 662 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 GJA4P35212 333 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 PXNP49023 591 aaPredicted RBP23.19■■□□□ 1.3
SEC22C-213ENST00000456222 DLG4P78352 724 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 TRPC3Q13507 836 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 PDGFRLQ15198 375 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 RSPO4Q2I0M5 234 aaPredicted RBP23.19■■□□□ 1.3
SEC22C-213ENST00000456222 EML3Q32P44 896 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 PRR23BQ6ZRT6 265 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 DENND5BQ6ZUT9 1274 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 SYNPOQ8N3V7 929 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 OSCP1Q8WVF1 389 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 SDCBP2Q9H190 292 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 LINC00597Q9H2U6 94 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 ECT2Q9H8V3 914 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 EXOC1Q9NV70 894 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 DUS2Q9NX74 493 aaKnown RBP23.19■■□□□ 1.3
SEC22C-213ENST00000456222 DLL3Q9NYJ7 618 aa23.19■■□□□ 1.3
SEC22C-213ENST00000456222 PRR29P0C7W0 189 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 CMA1P23946 247 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 GALK1P51570 392 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 CLDN10P78369 228 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 LONP2Q86WA8 852 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 B3GALNT2Q8NCR0 500 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 C8orf48Q96LL4 319 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 RNF38Q9H0F5 515 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 ARHGAP26Q9UNA1 814 aa23.18■■□□□ 1.3
SEC22C-213ENST00000456222 ZNF840PA6NDX5 716 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 A8MXQ7 604 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 RNF40O75150 1001 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 PHACTR2O75167 634 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 C4BPAP04003 597 aaKnown RBP23.17■■□□□ 1.3
SEC22C-213ENST00000456222 ANXA13P27216 316 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 NOP14P78316 857 aaKnown RBP23.17■■□□□ 1.3
SEC22C-213ENST00000456222 FOXK2Q01167 660 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 SPEM2Q0P670 501 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 GRSF1Q12849 480 aaKnown RBP eCLIP23.17■■□□□ 1.3
SEC22C-213ENST00000456222 BIRC3Q13489 604 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 SIM2Q14190 667 aaPredicted RBP23.17■■□□□ 1.3
SEC22C-213ENST00000456222 KCNB1Q14721 858 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 SCARA5Q6ZMJ2 495 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 FSIP1Q8NA03 581 aa23.17■■□□□ 1.3
SEC22C-213ENST00000456222 SYAP1Q96A49 352 aaPredicted RBP23.17■■□□□ 1.3
SEC22C-213ENST00000456222 MED19A0JLT2 244 aaPredicted RBP23.16■■□□□ 1.3
SEC22C-213ENST00000456222 ANTXRLA6NF34 631 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 SCAMP3O14828 347 aaKnown RBP23.16■■□□□ 1.3
SEC22C-213ENST00000456222 TRIM66O15016 1216 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 FAM163BP0C2L3 166 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 ATICP31939 592 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 IFNAR2P48551 515 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 NCOA4Q13772 614 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 ZNF699Q32M78 642 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 LAIR1Q6GTX8 287 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 PAQR9Q6ZVX9 377 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 SLC9A9Q8IVB4 645 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 CPA6Q8N4T0 437 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 GOLGA5Q8TBA6 731 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 CEP295NLQ96MC4 621 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 VRTNQ9H8Y1 702 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 TRPM5Q9NZQ8 1165 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 GMEB2Q9UKD1 530 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 USP18Q9UMW8 372 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 MYH10P35580 1976 aa23.16■■□□□ 1.3
SEC22C-213ENST00000456222 NR3C1P04150 777 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 HOXA6P31267 233 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 NDUFA8P51970 172 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 TAF10Q12962 218 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 PUM1Q14671 1186 aaKnown RBP eCLIP23.15■■□□□ 1.3
SEC22C-213ENST00000456222 GAB4Q2WGN9 574 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 C1orf220Q5T0J3 134 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 DGLUCYQ7Z3D6 616 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 SECISBP2LQ93073 1101 aaKnown RBP23.15■■□□□ 1.3
SEC22C-213ENST00000456222 SPATA32Q96LK8 384 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 KCNK16Q96T55 309 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 P2RY13Q9BPV8 354 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 ELOVL4Q9GZR5 314 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 RAB23Q9ULC3 237 aa23.15■■□□□ 1.3
SEC22C-213ENST00000456222 LEFTY2O00292 366 aa23.14■■□□□ 1.29
SEC22C-213ENST00000456222 RPN1P04843 607 aaKnown RBP23.14■■□□□ 1.29
SEC22C-213ENST00000456222 TCF3P15923 654 aa23.14■■□□□ 1.29
SEC22C-213ENST00000456222 IFRD2Q12894 506 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms