RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SLITRK6Q9H5Y7 841 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 NRDE2Q9H7Z3 1164 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 DNAJB4Q9UDY4 337 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 FAM153AQ9UHL3 310 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 PRG3Q9Y2Y8 225 aaPredicted RBP16.71■□□□□ 0.27
SNX17-204ENST00000453453 CARNS1A5YM72 827 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 H0YGN5 161 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 TADA2AO75478 443 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 GZMAP12544 262 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 DEFB103AP81534 67 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SKIDA1Q1XH10 827 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 WSCD1Q658N2 575 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 KCTD16Q68DU8 428 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 TTC19Q6DKK2 380 aaPredicted RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 MAATS1Q7Z4T9 603 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 GIMAP7Q8NHV1 300 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 HASPINQ8TF76 798 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 KBTBD7Q8WVZ9 684 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 IFT81Q8WYA0 676 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SUSD3Q96L08 255 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 TWNKQ96RR1 684 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 NFS1Q9Y697 457 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 TSC2P49815 1807 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 E7EVH7 732 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 M0QZQ0 153 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 RAD51CO43502 376 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 B4GALT3O60512 393 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 RTN2O75298 545 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 DNAJC8O75937 253 aaPredicted RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 LSM8O95777 96 aaKnown RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 CALCAP01258 141 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SYN1P17600 705 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SLC8A1P32418 973 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 BRCC3P46736 316 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 EIF3BP55884 814 aaKnown RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 ORC1Q13415 861 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 PPP2R5EQ16537 467 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 CLEC16AQ2KHT3 1053 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 RNF187Q5TA31 235 aaPredicted RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SGSM3Q96HU1 749 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 SMARCAL1Q9NZC9 954 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 INTUQ9ULD6 942 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 ZMYND8Q9ULU4 1186 aaPredicted RBP16.7■□□□□ 0.26
SNX17-204ENST00000453453 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 PCDHGC3Q9UN70 934 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 STXBP5LQ9Y2K9 1186 aa16.7■□□□□ 0.26
SNX17-204ENST00000453453 A0A0A6YYK5 440 aaPredicted RBP16.69■□□□□ 0.26
SNX17-204ENST00000453453 NRP1O14786 923 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 CYP11A1P05108 521 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 TYMPP19971 482 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 PCSK1P29120 753 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 HSD17B3P37058 310 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 PPP2R2AP63151 447 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
SNX17-204ENST00000453453 RPS6KA1Q15418 735 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 SNCBQ16143 134 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
SNX17-204ENST00000453453 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
SNX17-204ENST00000453453 THEM5Q8N1Q8 247 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 OLIG1Q8TAK6 271 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 SEC14L1Q92503 715 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 MS4A14Q96JA4 679 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 YME1L1Q96TA2 773 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 KDM4CQ9H3R0 1056 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 ADAM28Q9UKQ2 775 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 NENFQ9UMX5 172 aa16.69■□□□□ 0.26
SNX17-204ENST00000453453 PTPRSQ13332 1948 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 I3L4J1 428 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 BUB1O43683 1085 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 GSTA1P08263 222 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 PDGFRBP09619 1106 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 NSFP46459 744 aaKnown RBP16.68■□□□□ 0.26
SNX17-204ENST00000453453 SLC11A1P49279 550 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
SNX17-204ENST00000453453 XRCC4Q13426 336 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 BTG3Q14201 252 aaPredicted RBP16.68■□□□□ 0.26
SNX17-204ENST00000453453 CLUL1Q15846 466 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 CNGA2Q16280 664 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 TMEM240Q5SV17 173 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 CROCCP2Q86T23 111 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 CACNA2D3Q8IZS8 1091 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 CRYBG2Q8N1P7 616 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 CTNNBL1Q8WYA6 563 aaPredicted RBP16.68■□□□□ 0.26
SNX17-204ENST00000453453 TFAP2BQ92481 460 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 TRIM11Q96F44 468 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 CCDC114Q96M63 670 aa16.68■□□□□ 0.26
SNX17-204ENST00000453453 ZNF518BQ9C0D4 1074 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms