RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 BPIFB4P59827 614 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 LRMPQ12912 555 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SMAD4Q13485 552 aaKnown RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 MEA1Q16626 185 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 ATAT1Q5SQI0 421 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 IQCEQ6IPM2 695 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 PHLDB3Q6NSJ2 640 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 LLGL2Q6P1M3 1020 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 GPR149Q86SP6 731 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 GLYCTKQ8IVS8 523 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SMRP1Q8NCR6 262 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 VN1R2Q8NFZ6 395 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SLC7A14Q8TBB6 771 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 ATXN2LQ8WWM7 1075 aaKnown RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SHC3Q92529 594 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 MYLPFQ96A32 169 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SMARCD1Q96GM5 515 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 TMEM176AQ96HP8 235 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 CRACR2AQ9BSW2 395 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 LSM14BQ9BX40 385 aaKnown RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 EDEM3Q9BZQ6 932 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 ADAM7Q9H2U9 754 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 UBE2TQ9NPD8 197 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 CRTAC1Q9NQ79 661 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 AVENQ9NQS1 362 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 CLEC1BQ9P126 229 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 GTF3C4Q9UKN8 822 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 PTPRDP23468 1912 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 MYBPHLA2RUH7 354 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 CAPN5O15484 640 aaPredicted RBP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 LINC01565O15544 149 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 MED7O43513 233 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 OR4Q2P0C623 313 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 CCDC172P0C7W6 258 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 VDRP11473 427 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 UCHL3P15374 230 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ACO1P21399 889 aaKnown RBP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 KCNA5P22460 613 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ANXA13P27216 316 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 GTF2F1P35269 517 aaKnown RBP eCLIP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ZNF132P52740 706 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 RAD23BP54727 409 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 UBASH3AP57075 661 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 PSMC1P62191 440 aaKnown RBP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 FANCCQ00597 558 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 CYP27A1Q02318 531 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 DUSP4Q13115 394 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 NR1I3Q14994 352 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 SYCP1Q15431 976 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 MGAT5BQ3V5L5 792 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 SGO2Q562F6 1265 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 FIGNQ5HY92 759 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 MDH1BQ5I0G3 518 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 KLHDC7AQ5VTJ3 777 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ARHGAP17Q68EM7 881 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 SYCE2Q6PIF2 218 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 TMEM270Q6UE05 265 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 EP400NLQ6ZTU2 488 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 RRAGAQ7L523 313 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ARHGEF19Q8IW93 802 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 WHAMMQ8TF30 809 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 PPM1EQ8WY54 764 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 PCED1BQ96HM7 432 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 SPATA17Q96L03 361 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ZNF512Q96ME7 567 aaPredicted RBP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 PGLYRP2Q96PD5 576 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 HNRNPABQ99729 332 aaKnown RBP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ARID3AQ99856 593 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 NUP58Q9BVL2 599 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 STK33Q9BYT3 514 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 PNPLA8Q9NP80 782 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 SIX2Q9NPC8 291 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ATP13A2Q9NQ11 1180 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 COMMD8Q9NX08 183 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ABI2Q9NYB9 513 aaPredicted RBP9.24□□□□□ -0.93
COL28A1-205ENST00000453441 CEP72Q9P209 647 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 ZMYM5Q9UJ78 669 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 DNAJC12Q9UKB3 198 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 MYO6Q9UM54 1294 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 SIK3Q9Y2K2 1263 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 YIPF1Q9Y548 306 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 PCDHB4Q9Y5E5 795 aa9.24□□□□□ -0.93
COL28A1-205ENST00000453441 CCDC195A0A1B0GUA6 201 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 ZNF197O14709 1029 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 LRRN2O75325 713 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 MICAL2O94851 1124 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SEC24AO95486 1093 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 FAM200BP0CF97 657 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 CSH1P0DML2 217 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 CSH2P0DML3 217 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 KRT5P13647 590 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SARM1Q6SZW1 724 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 ACOT1Q86TX2 421 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms