RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CTIFO43310 598 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 TRAPPC3O43617 180 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SLU7O95391 586 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 FGBP02675 491 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 OR4Q2P0C623 313 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 LINC00271P0C7V0 271 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 FAM200BP0CF97 657 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 KRT3P12035 628 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 NPR3P17342 541 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MAN1A1P33908 653 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 CTNNA1P35221 906 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 GTF2F1P35269 517 aaKnown RBP eCLIP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SCNN1AP37088 669 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SLC1A1P43005 524 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 ACADSBP45954 432 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MARCKSL1P49006 195 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 CDR1P51861 262 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 RABGGTBP53611 331 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MAP3K7CLP57077 242 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 TAS2R40P59535 323 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 HTRA4P83105 476 aaPredicted RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SLC6A3Q01959 620 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 FPGSQ05932 587 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 ADCY1Q08828 1119 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 PPIGQ13427 754 aaKnown RBP eCLIP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 TAF5Q15542 800 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 RAB41Q5JT25 222 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 TMEM240Q5SV17 173 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 FAM171A1Q5VUB5 890 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 DAB2IPQ5VWQ8 1189 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 OR6B2Q6IFH4 312 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 FAM117BQ6P1L5 589 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 RSPO2Q6UXX9 243 aaPredicted RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 OTOP2Q7RTS6 562 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 ZNF572Q7Z3I7 529 aaPredicted RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SCUBE3Q8IX30 993 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 CMTR2Q8IYT2 770 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SLC39A11Q8N1S5 342 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 RASGEF1CQ8N431 466 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 ARFGAP1Q8N6T3 406 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 NIPA2Q8N8Q9 360 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MSANTD4Q8NCY6 345 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 IPO4Q8TEX9 1081 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 FNIP1Q8TF40 1166 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 CLEC4CQ8WTT0 213 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 ALG3Q92685 438 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MYLPFQ96A32 169 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 IGSF21Q96ID5 467 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MS4A14Q96JA4 679 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 PBKQ96KB5 322 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 B3GALT6Q96L58 329 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MCEEQ96PE7 176 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 KCNK16Q96T55 309 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 PSMB7Q99436 277 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MED10Q9BTT4 135 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SELENOOQ9BVL4 669 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 RHOBTB2Q9BYZ6 727 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MIS12Q9H081 205 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 METTL5Q9NRN9 209 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 EHD2Q9NZN4 543 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 IP6K2Q9UHH9 426 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
SDC4P-201ENST00000453285 MYO18AQ92614 2054 aaKnown RBP6.32□□□□□ -1.4
SDC4P-201ENST00000453285 SHROOM3Q8TF72 1996 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 SF3B1O75533 1304 aaKnown RBP eCLIP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 C2CD4BA6NLJ0 364 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 MIF4GDA9UHW6 222 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 F8VP50 259 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 DPYSL4O14531 572 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 KCNK3O14649 394 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 TADA3O75528 432 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 AP1G2O75843 785 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 VNN2O95498 520 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 LCP1P13796 627 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 TCF4P15884 667 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 BDNFP23560 247 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 FLT3P36888 993 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 ALDH7A1P49419 539 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 NDUFV1P49821 464 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 DNA2P51530 1060 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 TSPY1Q01534 308 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 ELAVL2Q12926 359 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 PIGHQ14442 188 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 MAPRE1Q15691 268 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 RTP2Q5QGT7 225 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 AADACL2Q6P093 401 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CC2D1AQ6P1N0 951 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 DCUN1D2Q6PH85 259 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 KCNT2Q6UVM3 1135 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 RSRC2Q7L4I2 434 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 SLC26A9Q7LBE3 791 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 ARCQ7LC44 396 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 BHLHA9Q7RTU4 235 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 GPRIN1Q7Z2K8 1008 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CEP57Q86XR8 500 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms