RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 DRC1Q96MC2 740 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 AIFM3Q96NN9 605 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 SEMA4CQ9C0C4 833 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 GCNT4Q9P109 453 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 IL17BQ9UHF5 180 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 KNL1Q8NG31 2342 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 TBC1D3BA6NDS4 549 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 ABLIM1O14639 778 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 CYP17A1P05093 508 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 CYP11A1P05108 521 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 HOXB2P14652 356 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 HNF1BP35680 557 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 RESTQ13127 1097 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 LY6DQ14210 128 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 DHCR24Q15392 516 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 DCP1BQ8IZD4 617 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 ZNF513Q8N8E2 541 aaPredicted RBP13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 MIR1-1HGQ9H1L0 117 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 NXF1Q9UBU9 619 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 DSEQ9UL01 958 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 ARHGAP26Q9UNA1 814 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
AC004540.1-204ENST00000449537 MEI4A8MW99 385 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 CPLX1O14810 134 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 MED24O75448 989 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 TADA3O75528 432 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 NFICP08651 508 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 GPR15P49685 360 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 KDSRQ06136 332 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 KCNH2Q12809 1159 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 KCNB1Q14721 858 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 RTP5Q14D33 572 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 FILIP1Q7Z7B0 1213 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 SPACA3Q8IXA5 215 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 ZCCHC9Q8N567 271 aaKnown RBP13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 TRMT2BQ96GJ1 504 aaKnown RBP13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 MYRFLQ96LU7 910 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 NRSN2Q9GZP1 204 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 OBSL1O75147 1896 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 ATMQ13315 3056 aa13.56□□□□□ -0.24
AC004540.1-204ENST00000449537 TTC26A0AVF1 554 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 C2orf78A6NCI8 922 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 SLC9A3R1O14745 358 aaPredicted RBP13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 PPEF2O14830 753 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 BCAT2O15382 392 aaPredicted RBP13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 CXCL8P10145 99 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 NDUFV2P19404 249 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 NTSR1P30989 418 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 WASP42768 502 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 NPTX2P47972 431 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 PDE6CP51160 858 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 PEX3P56589 373 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 ATP2C1P98194 919 aaPredicted RBP13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 BNC1Q01954 994 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 PKDCCQ504Y2 493 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 SDE2Q6IQ49 451 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 RHBDF2Q6PJF5 856 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 NUDT18Q6ZVK8 323 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 C12orf40Q86WS4 652 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 OXER1Q8TDS5 423 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 TSC2P49815 1807 aa13.55□□□□□ -0.24
AC004540.1-204ENST00000449537 MYOFQ9NZM1 2061 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 A0A1W2PQF6 199 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 LEFTY2O00292 366 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 EPB41L2O43491 1005 aaKnown RBP13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 TOM1L1O75674 476 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 NOL4O94818 638 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 ADH1CP00326 375 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 CLTAP09496 248 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 CD6P30203 668 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 ACTN2P35609 894 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 GRK6P43250 576 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 TARDBPQ13148 414 aaKnown RBP eCLIP13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 DDR2Q16832 855 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 KIAA1958Q8N8K9 716 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 IPO4Q8TEX9 1081 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms