RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MCRS1Q96EZ8 462 aa10.19□□□□□ -0.78
RFC4-210ENST00000449502 TMEM169Q96HH4 297 aa10.19□□□□□ -0.78
RFC4-210ENST00000449502 TTPALQ9BTX7 342 aa10.19□□□□□ -0.78
RFC4-210ENST00000449502 UBXN6Q9BZV1 441 aa10.19□□□□□ -0.78
RFC4-210ENST00000449502 CARD9Q9H257 536 aa10.19□□□□□ -0.78
RFC4-210ENST00000449502 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
RFC4-210ENST00000449502 CRTAC1Q9NQ79 661 aa10.19□□□□□ -0.78
RFC4-210ENST00000449502 TRIP12Q14669 1992 aaPredicted RBP10.18□□□□□ -0.78
RFC4-210ENST00000449502 GOLGA6L10A0A0M3HER8 536 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 NT5C1B-RDH14C9J2C7 533 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 PGRMC1O00264 195 aaKnown RBP10.18□□□□□ -0.78
RFC4-210ENST00000449502 TULP2O00295 520 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 B4GALT3O60512 393 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 CPB1P15086 417 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 PDGFRAP16234 1089 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 BDNFP23560 247 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 ITGB8P26012 769 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 SDC4P31431 198 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 CTNNA1P35221 906 aaKnown RBP10.18□□□□□ -0.78
RFC4-210ENST00000449502 SCNN1AP37088 669 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 GRIK1P39086 918 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 RPL7AP62424 266 aaKnown RBP10.18□□□□□ -0.78
RFC4-210ENST00000449502 DEFB103AP81534 67 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 ACAP1Q15027 740 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 SLC39A12Q504Y0 691 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 FAM171BQ6P995 826 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 KCNT2Q6UVM3 1135 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 CREG2Q8IUH2 290 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 CCDC50Q8IVM0 306 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 SCUBE3Q8IX30 993 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 OR10T2Q8NGX3 314 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 FAM149B1Q96BN6 582 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.18□□□□□ -0.781e-6■□□□□ 8.5
RFC4-210ENST00000449502 ZCWPW1Q9H0M4 648 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 MARCH5Q9NX47 278 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 ABI2Q9NYB9 513 aaPredicted RBP10.18□□□□□ -0.78
RFC4-210ENST00000449502 MTUS1Q9ULD2 1270 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 PCDHB5Q9Y5E4 795 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 PCDHA3Q9Y5H8 950 aa10.18□□□□□ -0.78
RFC4-210ENST00000449502 TCRBV5S1A1TA0A578 114 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 CAPN9O14815 690 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 TRIM66O15016 1216 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 DDX3YO15523 660 aaKnown RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 PAPSS1O43252 624 aaPredicted RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 GRAP2O75791 330 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 KRT1P04264 644 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 KRT7P08729 469 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 FGFR3P22607 806 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 RFC1P35251 1148 aaPredicted RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 PPM1AP35813 382 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 TKTL1P51854 596 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 ZNF143P52747 638 aaPredicted RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 KRT17Q04695 432 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 ADIGQ0VDE8 80 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 SMARCB1Q12824 385 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 USP41Q3LFD5 358 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 OLFML1Q6UWY5 402 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 CLEC20AQ6ZU45 233 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 CRIPAKQ8N1N5 446 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 EMC1Q8N766 993 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 NIPA2Q8N8Q9 360 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 JOSD2Q8TAC2 188 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 ACTRT1Q8TDG2 376 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 MAIP1Q8WWC4 291 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 RXFP2Q8WXD0 754 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 DPF3Q92784 378 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 IGSF21Q96ID5 467 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 RBM41Q96IZ5 413 aaKnown RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 MS4A14Q96JA4 679 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 RTP3Q9BQQ7 232 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 CNPY3Q9BT09 278 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 TRIM62Q9BVG3 475 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 GPR62Q9BZJ7 368 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 TRIM7Q9C029 511 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 CNGB3Q9NQW8 809 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 DDX56Q9NY93 547 aaKnown RBP10.17□□□□□ -0.78
RFC4-210ENST00000449502 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.17□□□□□ -0.78
RFC4-210ENST00000449502 SPG21Q9NZD8 308 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 TJP2Q9UDY2 1190 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 STK39Q9UEW8 545 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 PCDHB12Q9Y5F1 795 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 FRMPD3Q5JV73 1810 aa10.17□□□□□ -0.78
RFC4-210ENST00000449502 F8VP50 259 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 KRIT1O00522 736 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 PRPSAP2O60256 369 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 HSF2BPO75031 334 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 TADA3O75528 432 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 ZRANB2O95218 330 aaKnown RBP eCLIP10.16□□□□□ -0.78
RFC4-210ENST00000449502 GLI1P08151 1106 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 OR4Q2P0C623 313 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.78
RFC4-210ENST00000449502 PBX3P40426 434 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 CDR1P51861 262 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 MRPS5P82675 430 aaKnown RBP10.16□□□□□ -0.78
RFC4-210ENST00000449502 C2orf54Q08AI8 447 aa10.16□□□□□ -0.78
RFC4-210ENST00000449502 ZNF211Q13398 564 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms