RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ZNF362Q5T0B9 420 aaPredicted RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 RARS2Q5T160 578 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 THOC7Q6I9Y2 204 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 HPS6Q86YV9 775 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 FAM71AQ8IYT1 594 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SERAC1Q96JX3 654 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 C7orf26Q96N11 449 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 BIRC8Q96P09 236 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SHCBP1LQ9BZQ2 653 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 GINM1Q9NU53 330 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 COPEO14579 308 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 STAMBPO95630 424 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 ZBED1O96006 694 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 POLD1P28340 1107 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 CLK2P49760 499 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PTK7Q13308 1070 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PDE1CQ14123 709 aaPredicted RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 NFIL3Q16649 462 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SYCP2LQ5T4T6 812 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 RNASEH2BQ5TBB1 312 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 DENND5BQ6ZUT9 1274 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 MAPKAPK5Q8IW41 473 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 NEDD1Q8NHV4 660 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SNX27Q96L92 541 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PAIP1Q9H074 479 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 CNTN3Q9P232 1028 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SERPINA10Q9UK55 444 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SHOC2Q9UQ13 582 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 USTQ9Y2C2 406 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 ADAM23O75077 832 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 CYP11B1P15538 503 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 AOC1P19801 751 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 CDK8P49336 464 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 RAB15P59190 212 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 CCDC142Q17RM4 750 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 ITPRIPL1Q6GPH6 555 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PGM2L1Q6PCE3 622 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC2A7Q6PXP3 512 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 RHPN2Q8IUC4 686 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 RHOT1Q8IXI2 618 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PPP1R10Q96QC0 940 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 SRPK1Q96SB4 655 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 EBF4Q9BQW3 602 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PRDM16Q9HAZ2 1276 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 TFCP2L1Q9NZI6 479 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PSMD13Q9UNM6 376 aa9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 GNEQ9Y223 722 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 FAM32AQ9Y421 112 aaKnown RBP9.82□□□□□ -0.84
SYNPO2-204ENST00000448416 PNMA6FA0A0J9YX94 578 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L15C9J2P7 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L13C9JLJ4 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L11C9JVI0 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L18D6R9N7 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L22D6RA61 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L17D6RBQ6 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L19D6RCP7 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L20D6RJB6 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 H3BNX3 289 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 LIASO43766 372 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 CSDE1O75534 798 aaKnown RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 KRT10P13645 584 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 ATF7P17544 494 aaPredicted RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PHKA2P46019 1235 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 CLCN2P51788 898 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L24Q0WX57 530 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 CHI3L2Q15782 390 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PRR16Q569H4 304 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 C6orf52Q5T4I8 152 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 CIAPIN1Q6FI81 312 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 USP17L6PQ6QN14 398 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 STXBP4Q6ZWJ1 553 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 DEFB107AQ8IZN7 70 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 TMIGD2Q96BF3 282 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 DHRS4Q9BTZ2 278 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 DMAC2Q9NW81 257 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 C6orf203Q9P0P8 240 aaPredicted RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 NUP98P52948 1817 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 XPO1O14980 1071 aaKnown RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 SPTLC1O15269 473 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 INHBAP08476 426 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PPARGP37231 505 aaPredicted RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PPP3CAQ08209 521 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 KBTBD6Q86V97 674 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 FAM178BQ8IXR5 827 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 GALNT4Q8N4A0 578 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 SCAIQ8N9R8 606 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 FBXO36Q8NEA4 188 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 TSPAN14Q8NG11 270 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 TRIM56Q9BRZ2 755 aaKnown RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PCIF1Q9H4Z3 704 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 SF3B1O75533 1304 aaKnown RBP eCLIP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 SGK1O00141 431 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 BCAP31P51572 246 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 FAAP100Q0VG06 881 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PDK1Q15118 436 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 BBS9Q3SYG4 887 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 DHRS4L2Q6PKH6 230 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms